AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g00360 ATGGCTTCGTTTCGGCTAGTTCTGCTGTTCTTAACCCACATTATTTCGCTTGCAAGCATCTGTTTCGCTGAGGATCCCTTCGTTTTCTATGATTGGGAGGTCTCTTACATCACTGCTGCTCCTTTGGGCGTCGAACAGCAGGTTATAGCGATTGACGGCAAGTTTCCGGGCCCCGTTATTAATGCTACTACTAATAACAATGTTGTGGTGAATATAACTAACAGATTAGATGAGGATCTTCTTATCACTTGGTCTGGAATCCAGCAACGCCGTAACTCTTGGCAAGATGGTGTCCACGGCACCAATTGTCCAATCCCTGCCGGCTGGAAATGGTCTTACCAGTTTCAGGTCAAGGATCAGATTGGGAGCTTCTTCTATTCCCCTTCGCTCAATTTACAGAGAGCTTCGGGCGGATACGGTGGTTTTATTATAAATAACCGAGTTGTGATCCCAATTCCTTTTGCAACTCCAGATGGGGATATCACCATTATGATTGGTGACTGGTACAACCGAAATCATACGGCACTGAAAGATACCCTTGACTCTGGCAAAGGCCTTGGGATGCCTGATGGAGTTCTCATTAATGGGAAGGGACCTTACAGATACAACAACACACTTGTTCCGGATGGCATTGAGTATGAAACCATTGATGTCCATCCAGGAAAAACTTATCGCCTTCGTGTACACAATGTTGGAGTCTCAACTAGTTTGAACTTCAGGATTCAGAACCATAACCTTCTTCTTGCAGAGAGCGAGGGCTCTTACACTGTTCAACAAAATTATACTAGCCTAGATATTCATGTAGGACAATCTTATTCTTTCTTGCTTACCACGGATCAGAATGCCAGTTCTGATTACTACATTGTAGCAAGTGCAAGGTTTGTGAATGAGTCACTTTGGACAAGAGTTACTGGTGTTGCCATCTTGCGCTATTCTAATTCAAAGGGAAAGGCACATGGTCCTCTCCCTGACCCACCAAATGATGAGTTTGACAAGACATTTTCAATGAACCAGGCTAGATCCATCAGATGGAATGTCTCCGCTAGTGGTGCTCGCCCTAATCCTCAGGGTTCTTTTAGATATGGCTCAATCAATGTGACTGATGTATATGTGCTGAAGAATAAGCCATCAGTAATGATTAATGGAAAACGCCGGTACGCACTCAGTGGTGTCTCATTTGTCAATCCCGAGACACCCATTAGGCTTGCTGATCAGTTTCACATTAAGGGAGTTTACAAGCTTGATTTCCCAAATTTACCACTTACAGGGCCACCTCGGCTTGAAACTTCAGTAATTAATGGTACCTTTCGAGGATTTATGGAAATTATACTACAGAACAATGACACTGTGATCCAGAGCTATCACATGGATGGATATGCATTTTTTGTTGTCGGAATGGATTATGGGGAGTGGACAAATAACAGCAGGGGGACATATAATAAATGGGATGGAATTGCTCGCTCCACAGTACAGGTTTTTCCTGGAGCTTGGACAGCAATCTTAATCTCTCTTGACAATGTTGGAGTGTGGAATTTGAGAGCAGAGAACCTCGACAGACGGTATCTTGGCCAAGAAACATATGTAAGGGTTGTCAATCCAGAGGCTACCAATAAAACTGAGTTGCCTCCTCCGGACAATGTCCTATATTGTGGTGCCCTTAAAAGCAGGCAAAAGCCACAGCTTGCTTCTGGAACATCATTCATTGGCAGAGAATCAAAGCTATTCATCAATATGCTGATGGTTCTGTTGGCTGCCACCTTCATCTCCTGTTGA 1773 43.88 MASFRLVLLFLTHIISLASICFAEDPFVFYDWEVSYITAAPLGVEQQVIAIDGKFPGPVINATTNNNVVVNITNRLDEDLLITWSGIQQRRNSWQDGVHGTNCPIPAGWKWSYQFQVKDQIGSFFYSPSLNLQRASGGYGGFIINNRVVIPIPFATPDGDITIMIGDWYNRNHTALKDTLDSGKGLGMPDGVLINGKGPYRYNNTLVPDGIEYETIDVHPGKTYRLRVHNVGVSTSLNFRIQNHNLLLAESEGSYTVQQNYTSLDIHVGQSYSFLLTTDQNASSDYYIVASARFVNESLWTRVTGVAILRYSNSKGKAHGPLPDPPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDVYVLKNKPSVMINGKRRYALSGVSFVNPETPIRLADQFHIKGVYKLDFPNLPLTGPPRLETSVINGTFRGFMEIILQNNDTVIQSYHMDGYAFFVVGMDYGEWTNNSRGTYNKWDGIARSTVQVFPGAWTAILISLDNVGVWNLRAENLDRRYLGQETYVRVVNPEATNKTELPPPDNVLYCGALKSRQKPQLASGTSFIGRESKLFINMLMVLLAATFISC 590
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g00360 590 FunFam Monocopper oxidase-like protein 158 351 - -
Busi8g00360 590 FunFam Monocopper oxidase-like protein 363 561 - -
Busi8g00360 590 Gene3D - 20 146 IPR008972 -
Busi8g00360 590 SUPERFAMILY Cupredoxins 154 353 IPR008972 -
Busi8g00360 590 Gene3D - 158 351 IPR008972 -
Busi8g00360 590 Pfam Multicopper oxidase 160 314 IPR001117 -
Busi8g00360 590 Gene3D - 363 560 IPR008972 -
Busi8g00360 590 SUPERFAMILY Cupredoxins 22 174 IPR008972 -
Busi8g00360 590 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Busi8g00360 590 PANTHER MULTI-COPPER OXIDASE 29 542 IPR045087 GO:0016491(PANTHER)|GO:0046658(PANTHER)
Busi8g00360 590 Pfam Multicopper oxidase 398 534 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
Busi8g00360 590 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507(InterPro)
Busi8g00360 590 SUPERFAMILY Cupredoxins 375 551 IPR008972 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g00360 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr8:5002691 Busi9g00136 Busi-Chr9:1418873 dispersed
Busi Busi-Chr10:22044502 Busi8g00360 Busi-Chr8:5002691 transposed
Busi Busi-Chr6:16162095 Busi8g00360 Busi-Chr8:5002691 transposed
Busi Busi-Chr12:30336852 Busi8g00360 Busi-Chr8:5002691 wgd