AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g00369 ATGGCTGCTTCAATTCCAGCATCCCAAAACTTGTCCATGCCCCCCATAAAGACCCCCGAGAACTCATGCAAGGTCGCTGTGATAGGCGCCGGGGCGGCAGGTCTGGTCGCGGCACGAGAGCTGCGTAAAGAAGGTCACAGGGTTGTCGTGTTCGAGCAGAGCGACAGGATCGGAGGGACTTGGGTTTACAACCCTAACGTCGAGTCCGACCTACTGGGCCTCGACTCTTCTCGAACAATCGTTCACTCCAGTCTCTACGAATCCCTCCGCACCAATCTTCCCAGAGAAGTAATGGGGTTTCGCGACTACCCCTTTGTGGCTAAAGATGGAAGGGATAGGGACTCTCGGAGGTTTCCGGGTCATCGGGAGGTCTTACATTATCTTGAAGACTTCGCTCGCGACTTCAAACTCACTGAGTTGGTTCGGTTTGAGACCCAGGTCTTCCATGTTGGTTTGGTGGAAGAAGGGAAATGGGTGGTTAGGTATCGGAAGAAACATCAAAACGATAAGGAACATGTGCGGATCGATGAAGATGAAGTTTATGATAGCATTGTAGTTTGTAATGGGCATTTTACGGAGCCTCGAATTGCAGAAATTCCTGGCATTGATTCTTGGCCTGGGAAACAAATGCATAGCCACAACTATCGTGTTCCTGATCCATTTCAAGAAAAAATTGTAGTTTTGATAGGGAGTTCTGCTAGTGCTGTTGACATATCCCGGGATATTGCCGAAGTTGCTAAAGAAGTTCATATTGCAACAAGATCTTTTGGGGATGGAGCAACCAAGCAGCCTGGCTATAATAACATGTGGCTTCATTGTATGGTAAAAGGTGCCCTAGAAGATGGTACAGTGGTATTCCAAGATGGGACTTCAATCTTTGCTGATGTCGTTTTACACTGCACAGGGTACAAGTATCATTTTCCTTTCCTGAAGACCAACAATATTGTGACCGTTGACGACAACTGTGTTGGTCCATTGTATAAACACATTTTTCCACCAGTGTTGGCTCCATGTCTTTCTTTCATAGGATTGCCTTGGAAGGTTATTCCTTTCCCTATGCTTGAATTTCAAGTCAAGTGGGTAGCTGGTGTTTTATCTGGCAGCATTCTGCTTCCATCACAGGAGGAAATGATGGGAGATGTGGAAGCCTTCTACTCAAAACTTGAATCTGCTGGAATACCCAAGAGATACGCCCATAACATGTCAGATTATCAGTTTGAGTACAATGACTGGCTTGCAACTGAGTGTGGTTGTCCAGCCTCAGAGGAATGGAGGAAGGAGATGTATTATTCAACTGGAAAGAACAGGGTTTGCAGACCCAACACATATCGCGATGAATGGGAAGATCAAGACTTGGTGTCAGAAGCACAAACAGACTTTGTCCAGTACCTAAGTTGA 1398 46.42 MAASIPASQNLSMPPIKTPENSCKVAVIGAGAAGLVAARELRKEGHRVVVFEQSDRIGGTWVYNPNVESDLLGLDSSRTIVHSSLYESLRTNLPREVMGFRDYPFVAKDGRDRDSRRFPGHREVLHYLEDFARDFKLTELVRFETQVFHVGLVEEGKWVVRYRKKHQNDKEHVRIDEDEVYDSIVVCNGHFTEPRIAEIPGIDSWPGKQMHSHNYRVPDPFQEKIVVLIGSSASAVDISRDIAEVAKEVHIATRSFGDGATKQPGYNNMWLHCMVKGALEDGTVVFQDGTSIFADVVLHCTGYKYHFPFLKTNNIVTVDDNCVGPLYKHIFPPVLAPCLSFIGLPWKVIPFPMLEFQVKWVAGVLSGSILLPSQEEMMGDVEAFYSKLESAGIPKRYAHNMSDYQFEYNDWLATECGCPASEEWRKEMYYSTGKNRVCRPNTYRDEWEDQDLVSEAQTDFVQYLS 465
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g00369 465 PANTHER DIMETHYLANILINE MONOOXYGENASE 23 451 IPR050346 -
Busi8g00369 465 PRINTS Flavin-containing monooxygenase (FMO) signature 237 252 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 PRINTS Flavin-containing monooxygenase (FMO) signature 287 314 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 PRINTS Flavin-containing monooxygenase (FMO) signature 210 224 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 PRINTS Flavin-containing monooxygenase (FMO) signature 352 365 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 PRINTS Flavin-containing monooxygenase (FMO) signature 23 39 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 Gene3D - 24 446 IPR036188 -
Busi8g00369 465 FunFam Flavin-containing monooxygenase 198 300 - -
Busi8g00369 465 SUPERFAMILY FAD-NAD(P)-binding domain 21 257 IPR036188 -
Busi8g00369 465 Gene3D - 198 300 IPR036188 -
Busi8g00369 465 Pfam Flavin-binding monooxygenase-like 24 255 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 Pfam Flavin-binding monooxygenase-like 279 413 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 SUPERFAMILY FAD-NAD(P)-binding domain 269 450 IPR036188 -
Busi8g00369 465 PIRSF FMO 269 424 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Busi8g00369 465 PIRSF FMO 21 259 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g00369 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr12:30037113 Busi8g00369 Busi-Chr8:5095619 dispersed
Busi Busi-Chr12:30095838 Busi8g00369 Busi-Chr8:5095619 dispersed
Busi Busi-Chr8:5095619 Busi8g00380 Busi-Chr8:5222024 dispersed
Busi Busi-Chr14:8447795 Busi8g00369 Busi-Chr8:5095619 transposed
Busi Busi-Chr5:34889260 Busi8g00369 Busi-Chr8:5095619 wgd