AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g00371 ATGGGGGTTAAAGTACTTGTTGAAAGATTGTGGAACACTTCAGCAACGCCAAAGGAAGAAAGATCTGATCTGAGGGCTGATACTTTGCTTGAGTCTCAATTAGACAGCATGCTTACAATAGATGATGTTAATCCAAGTTCTGTGCAGAGATATACTGATTCTCTTAAAGAGATTGTAAAGCAGAAAATACTCAACCATGAGGCCATATTTAGGACGCAGGTCCATGAACTTCACCGTTTGTACAAAATACAGAAGACCTTAATGGAGGAAGTCAAATGGAAACAGCTTGACCAATTTACATCATGGAGAGAAACTGCTCAGTCAACCTTGCTGCCATCATGTAAACAGGCACTGGCAGAAGAGAAAACCTTTTTCACATTGTCCATGGTGGGTTCAATGCAAATGTTCAATCAGAACTCATCACTGCAGCACAAAGGAACCTGCTCTAGGCTTCAAGAAAGAGCTATTGACCTGCAACTTCCTGCAGATATGTACATCAGTTGTGTTAGTACCGAGCTTCCTGAGAGCAGGAATTTTTTGTCATCTCCCAAAGTACGCGATGAACCAAAAAAATTTCCCACCAGCATTCATGTTTCTGAACCAGAGGAGGTAAAACTTTCCTTGAATACTGAAGAGGGCAAAAAACAATCCGTTGAAAGTGCATCAAAGAGGACTGCTGGATCAGTCTCTTCTCTCACGTTTGAAGCTTCAACTAACTATTCTGGAGATAAGCATGGGGTGCAAATTCCTGTCTTATCTGAATCGAGCTTTTCAGGAAAAATGCCAAAAGACATAAGTCAAGGGCCGTTTGCTTGTTGCTCCCATGTAGACTACAATGAATGTTGCAAAATGCGGAAGTCTGTCAATGTAGATACAGGATTCATTGAATGCTGTGCTAGTAGGCCACCTGTTAGTCTTGTCACCAGCAAGCAAGAATCTTCTTTATGCAATGCAGCTCATGTGGACTCTAATGGAATTCAACACAAGGAATTGTCTTGTTTTTCTGATAATCCATCAGTGATCCATCCTCCAACTGCTAGGTCACCAGTTTTTGTTGAGGCATTCACTAACTACTCCCACAAAAGGAGTTGGGATGTTGCAGCTTGCTGGAAAAAATTAAGCACTGACTCAGACAACACTTCTGTTAGGCCTCAAAAGGATAATGTTGCATCTTCTTCTTTGACAGATTGTAGGATGCAAACCTGGCCTCGATGTGCAGTGGTTGGAGGAAATAGTCAGAGTGAACTGGGTCTTATAGATCTTGAGTCTCTGCCAGTGGATGATGCTGAACTCTGTGAAGACTTTGGCTACAGGAATGTCAAACAATGCAAGCCTAATGTGTACTTGTCATTGGGACTGCCAAATGGTGTTTCATCTGAGGATAATGAAGTAGATGTACAAACTAGAAAAGTTATGTGTAAAAAGAGTGAAGAAGATACAGTATCTTCAAGTCCCTTTCAATGTGATGTGGCTGAAAGTGGATACTGCAAAGAATCATTTGCAGCAAGAAAGTCCAGTTGTGTGACCAATAATTCAAGCAGTATAGAGGACTTCAAATCTGGAAAAGAAGATAGATACAAATTGGCAGAGGGGAATCTTTCTGGCTTTGAGGACTCAGTTACTACTCAGTTGGGGTCTCAAGCCACAGAAACTCACCCGGGTGAGCAGGACCCTGTTGAGGAAACTGGCTATAGCAGTGGTGCAAAGCTGGAATCATTTGAACTCACCGATTTGAAATATCAGAGTCAAAATGGTGCAGAAGAGGCATTTGGAATGGAAATATTGGTTGAAAGGGCAGCTGAGTCTCTCATGCTCATTTCTTTAGAAAGTTTAGAATCTTCCAAAGGGTGTGTTTCAAAGACTGATTCAAACGAGTTGGAAAACAAAGAGAGTGAGCTGCCTGAGTGTTCTTCAGATTCTTATGAGTCAATTGTGTTGAGGCTAACAGAAAGCAGTGTGGGTGACTTTGATGTGTCGTCGATACCCATGGACATAAATGAAACAGAGAAAAAGGAGTGCATATTTAGGTTGAAAAGGGGGAGGAGGCTCAAAGATTTCCAGAGAGACGTATTGCCTGGTTTGATGTCTCTTTCCAGGCATGAAATTTTTGAAGACATGCTCGTTATGGGGGAAATTATTAAATCAATGGAGTCCAGGAAGAACCGATCCAGAAAGGTTGATGGAGAGACTTGGTGTTCACCAGTGAGGGGCAGAAGATCAAGACTTAATTATGTTGGTCGACGATATTATGCATGA 2256 41.76 MGVKVLVERLWNTSATPKEERSDLRADTLLESQLDSMLTIDDVNPSSVQRYTDSLKEIVKQKILNHEAIFRTQVHELHRLYKIQKTLMEEVKWKQLDQFTSWRETAQSTLLPSCKQALAEEKTFFTLSMVGSMQMFNQNSSLQHKGTCSRLQERAIDLQLPADMYISCVSTELPESRNFLSSPKVRDEPKKFPTSIHVSEPEEVKLSLNTEEGKKQSVESASKRTAGSVSSLTFEASTNYSGDKHGVQIPVLSESSFSGKMPKDISQGPFACCSHVDYNECCKMRKSVNVDTGFIECCASRPPVSLVTSKQESSLCNAAHVDSNGIQHKELSCFSDNPSVIHPPTARSPVFVEAFTNYSHKRSWDVAACWKKLSTDSDNTSVRPQKDNVASSSLTDCRMQTWPRCAVVGGNSQSELGLIDLESLPVDDAELCEDFGYRNVKQCKPNVYLSLGLPNGVSSEDNEVDVQTRKVMCKKSEEDTVSSSPFQCDVAESGYCKESFAARKSSCVTNNSSSIEDFKSGKEDRYKLAEGNLSGFEDSVTTQLGSQATETHPGEQDPVEETGYSSGAKLESFELTDLKYQSQNGAEEAFGMEILVERAAESLMLISLESLESSKGCVSKTDSNELENKESELPECSSDSYESIVLRLTESSVGDFDVSSIPMDINETEKKECIFRLKRGRRLKDFQRDVLPGLMSLSRHEIFEDMLVMGEIIKSMESRKNRSRKVDGETWCSPVRGRRSRLNYVGRRYYA 751
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g00371 751 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 37 738 - -
Busi8g00371 751 MobiDBLite consensus disorder prediction 538 564 - -
Busi8g00371 751 Pfam Plant protein of unknown function (DUF863) 621 715 IPR008581 -
Busi8g00371 751 MobiDBLite consensus disorder prediction 538 553 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g00371 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr8:5106444 Busi8g00371 Busi-Chr8:5234878 dispersed
Busi Busi-Chr8:5234878 Busi14g00853 Busi-Chr14:8409396 dispersed
Busi Busi-Chr5:34878193 Busi8g00371 Busi-Chr8:5234878 wgd