Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi8g00384 | ATGCGAGTAAAAGAAATGCATCCTTTGTGTTGCATCTCCTTGGAGGGCCCAGGGATCGGATGCAGATCGCCGGAGGTCTTAACCATGAGAAGCGGTCTGATCGCTGGTTCTGCTGCGGCCTCCGGCGGATCTGACGGCAATGCTGGTCGAGAAATGGGATCTGACGTTAATGTCGCTGGAGTTCTGTACAAATGGACCAATTACGGGAAAGGATGGAGATCTCGATGGTTTTTGTTGAGAAACGGCGTTCTTTCGTATACGAAGATTCGACGATCGGAGAATGTCAGTATCTCGTTGACGAGCGACGAGTTTCGATTGATTGGCGATGCTTCGTCCGGTCGACTCTCGCGTCTCGACAGCGGTGGGAGAAGGAAGCAACAGAAAACAGTTCGCATCGTTCATCTCAAGGTCTCATCATTTCGTGAGAGTAGATCAGATGATAGAAAATTTTATGTTTTTACTGCCACGAAGACACTTCATCTAAGAACTGATTCAAAGTGTGATCGTGCTGCTTGGATAAATGCTTTAGTCACTTGTCGTAGCCTAATTTCTTTGAGACCACTGAATGACAAGTTTGCATTTGCCCCAAATGATATATCAGTGTCGACTGAACGGCTTAGAAGTCGTTTGCATGAAGAGGGAATCGATGGAGAACTTGTCTGTGAATGTGAGCAGATCATGTTATCAGAATTCTCAGAAATTCATGGAAAAATCAAAGCTCTTTGTGAAGAACGATCCAATTTGCTTGACACGTTAAGGCAGTTGGAGGCAGCTAATATTGAAGTTGATCCCAATGGACTGCATGACACCCAATTCAGACTGAAGAAGAGTGAATTTTCAAGCAATGGATGTGGAAAATATAGTGAATGCAGCACAACTGAATCATCTGATGATATTGACAAGCAAGAGGTTGAGGAAGTGTCAGATGAAGATCCACTTTCATTCTTTGATGCGAAAGAAAATTTTGGTGATTCCAGTTACCATGGTGGATTTGTTATAGGAGGTCCAAGCCCTGTTGAGAAGTTCAAACATGAAAATCAATGTGACATGGGGGAGCAGATGCATATAGAAAGACAAGATACTAATTGTAAGTCTCTGAAAATTATGAGGCGAAAGAAACTTCCTGACCCTATCGAGAAAGAGAAAGGTGTCAGCCTTTGGTCGATCATAAAAGACAATGTTGGAAAGGATCTTACACGTGTGTGTCTCCCTGTTTACTTCAATGAGCCGATATCATCCCTTCAGAAATGCTTTGAGGAATTAGAGTATTCATTTCTTCTGGATCGGGCATATGAGTATGGAAAATTGGGCAACAACCTGCTAAGAATTCTGAATGTAGCTGCCTTTGCCATCTCTGGTTATGCTTCAACTGAAGGTCGACACTGTAAACCCTTTAATCCGTTGTTAGGGGAAACGTATGAGGCGGACTACCCGGAGAAAGGGATTCGATTTTTCTCTGAGAAGGTTAGCCACCACCCTACGCAGATAGCCTTCCATTGTGAAGGCAAAGGGTGGAAACTCTGGGGTGACAGCAACCTGAGAAGTAAATTTTGGGGGCGGTCAATTCAGCTTGAGCCTCTTGGTGTTCTGACCCTGGAGTTTGATGATGGTGAGATTTTCCAGTGGAGTAAGGTCACAACATCGATTTATAATCTTATCCTTGGTAAATTATATTGTGATCACCACGGGACAATGCATATACATGGTAATGGTCCATATACATGCAAACTTAAATTCAAGGAGCAATCCATTCTTGATCGAAATCCTCACCAGGTACATGGATATGTTGAAGACATCACCGGAAAAAAGTTTGCCACTTTATTTGGGACGTGGAATGATAGTATGTGTTATATCAGTGGAGATGGAGCTGGAAAAACAATGAGTTCTAATACATCGGATGCTTCTGTATTATGGAAAAGGAATAAACCAACTCCTAATCTCACCCGGTACAACTTGACATCATTTGCAGTTGCACTAAATGAGATAACATCAGGGCTTCAGGTAGAGACTGTGTTGATGTTTGATAACGGATTAAGGAGAAGCTACCGCCCACGGACTCAAGGCTTAGACCGGACCAGCGACATCTGGAGAATGGAGGAATATGAGAAGGCAAATGCAGAGAAGTTACGGCTGGAGAGGAGGCAAAGGATGTCCAGGAAATTACAGGAAAATGGCTGGAAGCCAAGATGGTTCCAAAAGGCTGGGGAGGATGAGCCTTACCGCTATGCTGGTGGATACTGGGAGGCACGTGAACAGAGAAAGTGGGATCAATGCCCGGATATATTTGGTGAATTTAATGAGGACCTGCTTGTCAATGTCTGA | 2322 | 43.8 | MRVKEMHPLCCISLEGPGIGCRSPEVLTMRSGLIAGSAAASGGSDGNAGREMGSDVNVAGVLYKWTNYGKGWRSRWFLLRNGVLSYTKIRRSENVSISLTSDEFRLIGDASSGRLSRLDSGGRRKQQKTVRIVHLKVSSFRESRSDDRKFYVFTATKTLHLRTDSKCDRAAWINALVTCRSLISLRPLNDKFAFAPNDISVSTERLRSRLHEEGIDGELVCECEQIMLSEFSEIHGKIKALCEERSNLLDTLRQLEAANIEVDPNGLHDTQFRLKKSEFSSNGCGKYSECSTTESSDDIDKQEVEEVSDEDPLSFFDAKENFGDSSYHGGFVIGGPSPVEKFKHENQCDMGEQMHIERQDTNCKSLKIMRRKKLPDPIEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEELEYSFLLDRAYEYGKLGNNLLRILNVAAFAISGYASTEGRHCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTQIAFHCEGKGWKLWGDSNLRSKFWGRSIQLEPLGVLTLEFDDGEIFQWSKVTTSIYNLILGKLYCDHHGTMHIHGNGPYTCKLKFKEQSILDRNPHQVHGYVEDITGKKFATLFGTWNDSMCYISGDGAGKTMSSNTSDASVLWKRNKPTPNLTRYNLTSFAVALNEITSGLQVETVLMFDNGLRRSYRPRTQGLDRTSDIWRMEEYEKANAEKLRLERRQRMSRKLQENGWKPRWFQKAGEDEPYRYAGGYWEAREQRKWDQCPDIFGEFNEDLLVNV | 773 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi8g00384 | 773 | Pfam | Oxysterol-binding protein | 385 | 751 | IPR000648 | GO:0008289(InterPro) | |
| Busi8g00384 | 773 | SUPERFAMILY | PH domain-like | 54 | 179 | - | - | |
| Busi8g00384 | 773 | SMART | PH-update | 56 | 183 | IPR001849 | - | |
| Busi8g00384 | 773 | Gene3D | - | 52 | 183 | IPR011993 | - | |
| Busi8g00384 | 773 | Pfam | Pleckstrin homology domain | 63 | 176 | - | - | |
| Busi8g00384 | 773 | PANTHER | OXYSTEROL-BINDING PROTEIN-RELATED | 58 | 738 | IPR000648 | GO:0005829(PANTHER)|GO:0008289(InterPro)|GO:0015248(PANTHER)|GO:0016020(PANTHER)|GO:0032934(PANTHER)|GO:0043231(PANTHER) | |
| Busi8g00384 | 773 | Coils | Coil | 238 | 258 | - | - | |
| Busi8g00384 | 773 | ProSiteProfiles | PH domain profile. | 55 | 181 | IPR001849 | - | |
| Busi8g00384 | 773 | FunFam | Oxysterol-binding protein-related protein 2A | 697 | 764 | - | - | |
| Busi8g00384 | 773 | SUPERFAMILY | Oxysterol-binding protein-like | 380 | 765 | IPR037239 | - | |
| Busi8g00384 | 773 | Gene3D | - | 471 | 646 | - | - | |
| Busi8g00384 | 773 | FunFam | Oxysterol-binding protein-related protein 2A | 471 | 642 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi8g00384 | K20456 | oxysterol-binding protein 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr14:2957049 | Busi8g00384 | Busi-Chr8:5289325 | dispersed | |
| Busi | Busi-Chr14:3056364 | Busi8g00384 | Busi-Chr8:5289325 | dispersed | |
| Busi | Busi-Chr5:15269521 | Busi8g00384 | Busi-Chr8:5289325 | dispersed | |
| Busi | Busi-Chr7:22523822 | Busi8g00384 | Busi-Chr8:5289325 | dispersed | |
| Busi | Busi-Chr7:22540386 | Busi8g00384 | Busi-Chr8:5289325 | dispersed | |
| Busi | Busi-Chr8:5289325 | Busi9g02269 | Busi-Chr9:54640393 | dispersed | |
| Busi | Busi-Chr8:5289325 | Busi11g00310 | Busi-Chr11:20918516 | transposed |