Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi8g00385 | ATGGGTACTGGAGATCTTCTCAACATTCAACCTTCAGAACTCAAATTTCCCTTCGAATTGAAGAAGCAAAGCTCATGTTCTATGCAATTAACCAACAAGACTGATCAATATGTAGCCTTCAAGGTCAAAACAACCAACCCCAAAAAGTATTGTGTGCGTCCCAACACCGGAATAGTGTTGCCTGGGGCGTCATGCGATGTTACAGTTACTATGCAAGCCCAAAAGGAGGCCCCACCTGATATGCAGTGTAAAGATAAGTTCCTCCTTCAGAGTGTTGTTGCACCTCTTGGTGCAACTACAAAGGATATAACACCAGAGATGTTTAACAAAGAGGATGGAAGGGTTGTTGAGGAATTCAAATTGAGAGTGGTTTACATCCCTGCTAATCCACCCTCACCAGTGCCTGAAGGATCTGAAGAAGGAACTTCACCTAGGGCATCTGTGCTTGAGAATGGGAACCAAAACACCACACTTTTTGATGCTGTAACAAGATCCGTAGAGGAGCCGAACGAGAAGTCTTCTGAGGGATGGTCGATGATTTCCAAGTTGACTGAGGAGAAAAGTTCTGCTATCCAACAAAATCAGAAACTCCGCCAAGAGTTGGAATTGATGAGAAAAGAGATTAGCAAAAAGCGTGCTGGTGGTTTCTCCTTCTTATTTGTGGTACTAGTTGGCCTCCTGGGTGTTCTGGTTGGTTACCTTGTTAAGAAAACA | 714 | 43.84 | MGTGDLLNIQPSELKFPFELKKQSSCSMQLTNKTDQYVAFKVKTTNPKKYCVRPNTGIVLPGASCDVTVTMQAQKEAPPDMQCKDKFLLQSVVAPLGATTKDITPEMFNKEDGRVVEEFKLRVVYIPANPPSPVPEGSEEGTSPRASVLENGNQNTTLFDAVTRSVEEPNEKSSEGWSMISKLTEEKSSAIQQNQKLRQELELMRKEISKKRAGGFSFLFVVLVGLLGVLVGYLVKKT | 238 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi8g00385 | 238 | Gene3D | Immunoglobulins | 3 | 129 | IPR013783 | - | |
| Busi8g00385 | 238 | PIRSF | VAMP-assoc-prot | 1 | 237 | IPR016763 | GO:0005789(InterPro) | |
| Busi8g00385 | 238 | SUPERFAMILY | PapD-like | 3 | 138 | IPR008962 | - | |
| Busi8g00385 | 238 | Coils | Coil | 180 | 214 | - | - | |
| Busi8g00385 | 238 | FunFam | Vesicle-associated protein 1-1 | 1 | 129 | - | - | |
| Busi8g00385 | 238 | MobiDBLite | consensus disorder prediction | 130 | 153 | - | - | |
| Busi8g00385 | 238 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 6 | 235 | IPR016763 | GO:0005789(PANTHER)|GO:0005789(InterPro)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) | |
| Busi8g00385 | 238 | Pfam | MSP (Major sperm protein) domain | 7 | 109 | IPR000535 | - | |
| Busi8g00385 | 238 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 6 | 126 | IPR000535 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi8g00385 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr12:16454013 | Busi8g00385 | Busi-Chr8:5311649 | dispersed | |
| Busi | Busi-Chr12:30075803 | Busi8g00385 | Busi-Chr8:5311649 | dispersed | |
| Busi | Busi-Chr7:22549979 | Busi8g00385 | Busi-Chr8:5311649 | dispersed | |
| Busi | Busi-Chr8:5311649 | Busi8g00402 | Busi-Chr8:5570151 | dispersed | |
| Busi | Busi-Chr8:5311649 | Busi6g00350 | Busi-Chr6:3399959 | transposed |