Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi8g00487 | TCGTTTGAATTTTGTGGACACGCGGCGCACATCCGGTCGGGGTTCACGGTTGGTGTCCAGATAAGGGATCCACCAAAACCCATCTGCTCTTCTTCTCGTCTCTCTTCCTCTTTCGTCCGTTTCTCCAAAATCCCCATTAAGCCCTCGATCTTTCCTCGCAATTCCAAGCCTCCGTCTTCACTATTCACGACCCCCATGAACTTGTTGGGAAAGCTAGGGTTAGGGTTTGGTACCAGAGCCTCTGATGCCTCCATGGATTCCTCTTCTTCCGCGATTGCTCAAGGCCCCGACGACGATATCCCCGCTGCAGGGCAGCAGTTCGCGCAATTCGGCGCTGGATGCTTCTGGGGTGTTGAGTTGGCTTTCAGAGGGTGTCTGACTGAGGTTGGGTACAGTCAAGGTAATATTCATAACCCGACATATAACGATGTGTGTTCAGGTACGACCAATCATTCGGAGGTTGTTAGGATTCAGTACGATCCCAAGGAGTGCAGTTATGAGAATTTGCTCGATGCTTTTTGGGCTCGGCATGATCCGACCACGCTTAATCGTCAGGTACACAGTACAGGTCAGGAATATACTACTACACGCCTGAACAGGAGAAAGCAGCACGCGAGTCCAAGGAAAAACAACAGAAAGCTCTTGAACAGGAAGATTGTGACTGAAATCTTACCTGCAAAGAAGTTCTACAGGGCAGAGGAATACCACCAACAATACCTTGCAAAAGGGGGAAGATTTGGTTTCAAGCAGTCAGCTGATAAAGGTTGTAACGATCCAATCAGATGCTATGATTGTATTGGTGCACTAGATGGAACACATATTAGCGCTGTTATACCACTGGAACAACAAGTACCATATCGTGGTTGGAAA | 870 | 48.39 | SFEFCGHAAHIRSGFTVGVQIRDPPKPICSSSRLSSSFVRFSKIPIKPSIFPRNSKPPSSLFTTPMNLLGKLGLGFGTRASDASMDSSSSAIAQGPDDDIPAAGQQFAQFGAGCFWGVELAFRGCLTEVGYSQGNIHNPTYNDVCSGTTNHSEVVRIQYDPKECSYENLLDAFWARHDPTTLNRQVHSTGQEYTTTRLNRRKQHASPRKNNRKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSADKGCNDPIRCYDCIGALDGTHISAVIPLEQQVPYRGWK | 290 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi8g00487 | 290 | Gene3D | Peptide methionine sulphoxide reductase MsrA | 90 | 264 | IPR036509 | GO:0008113(InterPro) | |
| Busi8g00487 | 290 | PANTHER | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE | 89 | 262 | IPR050162 | GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER) | |
| Busi8g00487 | 290 | Hamap | Peptide methionine sulfoxide reductase MsrA [msrA]. | 105 | 254 | IPR002569 | GO:0008113(InterPro) | |
| Busi8g00487 | 290 | SUPERFAMILY | Peptide methionine sulfoxide reductase | 100 | 251 | IPR036509 | GO:0008113(InterPro) | |
| Busi8g00487 | 290 | NCBIfam | peptide-methionine (S)-S-oxide reductase MsrA | 108 | 242 | IPR002569 | GO:0008113(InterPro) | |
| Busi8g00487 | 290 | FunFam | Peptide methionine sulfoxide reductase | 95 | 264 | - | - | |
| Busi8g00487 | 290 | Pfam | Peptide methionine sulfoxide reductase | 108 | 242 | IPR002569 | GO:0008113(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi8g00487 | K07304 | peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr8:6607263 | Busi2g00969 | Busi-Chr2:26894586 | dispersed | |
| Busi | Busi-Chr1:29714745 | Busi8g00487 | Busi-Chr8:6607263 | transposed | |
| Busi | Busi-Chr12:15176390 | Busi8g00487 | Busi-Chr8:6607263 | wgd |