AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g00487 TCGTTTGAATTTTGTGGACACGCGGCGCACATCCGGTCGGGGTTCACGGTTGGTGTCCAGATAAGGGATCCACCAAAACCCATCTGCTCTTCTTCTCGTCTCTCTTCCTCTTTCGTCCGTTTCTCCAAAATCCCCATTAAGCCCTCGATCTTTCCTCGCAATTCCAAGCCTCCGTCTTCACTATTCACGACCCCCATGAACTTGTTGGGAAAGCTAGGGTTAGGGTTTGGTACCAGAGCCTCTGATGCCTCCATGGATTCCTCTTCTTCCGCGATTGCTCAAGGCCCCGACGACGATATCCCCGCTGCAGGGCAGCAGTTCGCGCAATTCGGCGCTGGATGCTTCTGGGGTGTTGAGTTGGCTTTCAGAGGGTGTCTGACTGAGGTTGGGTACAGTCAAGGTAATATTCATAACCCGACATATAACGATGTGTGTTCAGGTACGACCAATCATTCGGAGGTTGTTAGGATTCAGTACGATCCCAAGGAGTGCAGTTATGAGAATTTGCTCGATGCTTTTTGGGCTCGGCATGATCCGACCACGCTTAATCGTCAGGTACACAGTACAGGTCAGGAATATACTACTACACGCCTGAACAGGAGAAAGCAGCACGCGAGTCCAAGGAAAAACAACAGAAAGCTCTTGAACAGGAAGATTGTGACTGAAATCTTACCTGCAAAGAAGTTCTACAGGGCAGAGGAATACCACCAACAATACCTTGCAAAAGGGGGAAGATTTGGTTTCAAGCAGTCAGCTGATAAAGGTTGTAACGATCCAATCAGATGCTATGATTGTATTGGTGCACTAGATGGAACACATATTAGCGCTGTTATACCACTGGAACAACAAGTACCATATCGTGGTTGGAAA 870 48.39 SFEFCGHAAHIRSGFTVGVQIRDPPKPICSSSRLSSSFVRFSKIPIKPSIFPRNSKPPSSLFTTPMNLLGKLGLGFGTRASDASMDSSSSAIAQGPDDDIPAAGQQFAQFGAGCFWGVELAFRGCLTEVGYSQGNIHNPTYNDVCSGTTNHSEVVRIQYDPKECSYENLLDAFWARHDPTTLNRQVHSTGQEYTTTRLNRRKQHASPRKNNRKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSADKGCNDPIRCYDCIGALDGTHISAVIPLEQQVPYRGWK 290
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g00487 290 Gene3D Peptide methionine sulphoxide reductase MsrA 90 264 IPR036509 GO:0008113(InterPro)
Busi8g00487 290 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 89 262 IPR050162 GO:0005737(PANTHER)|GO:0008113(PANTHER)|GO:0034599(PANTHER)|GO:0036456(PANTHER)
Busi8g00487 290 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 105 254 IPR002569 GO:0008113(InterPro)
Busi8g00487 290 SUPERFAMILY Peptide methionine sulfoxide reductase 100 251 IPR036509 GO:0008113(InterPro)
Busi8g00487 290 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 108 242 IPR002569 GO:0008113(InterPro)
Busi8g00487 290 FunFam Peptide methionine sulfoxide reductase 95 264 - -
Busi8g00487 290 Pfam Peptide methionine sulfoxide reductase 108 242 IPR002569 GO:0008113(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g00487 K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr8:6607263 Busi2g00969 Busi-Chr2:26894586 dispersed
Busi Busi-Chr1:29714745 Busi8g00487 Busi-Chr8:6607263 transposed
Busi Busi-Chr12:15176390 Busi8g00487 Busi-Chr8:6607263 wgd