Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi8g00511 | ATGGAAGCACCTGACGGAAGCTCTTCTGATAAAAAATGGATTCCCCTCGAATCGAATCCTGATGTTATGAACCAGTTCCTTTGGGGGCTTGGTCTTCCAGATAATGAAGCAGAGTGTTTTGATGTGTATGGTTTGGATGATGAGCTCTTGGAGATGGTTCCAAAGCCTGTACTTGCCGTGTTGTTTCTTTTCCCCATGCCTGAAGAGACTGAAGAAGAGAAAATGTTGGACGGGAGTACTAAAAAGACACCAAGTGATAAAGTTTACTTCTTGAGGCAAACTGTTGGAAATGCTTGTGGGACAATTGGACTGCTTCATGCTCTTGGGAATGTAACTTCAGATATCAAGCTTGTGGAGGGGTCGTACTTGGATAGATTTTTCAAATCTACGGCAAGCATGGACCCATGGGAGCGTGCAGCTTTTCTTGAGAAAGACAGAGAGATGGAAGCCGCACATTCCATAGCAGCTGTTGCTGGTGATACAGAGGCAAGGGAACTGTATGAACTTGACGGAAGAAAGGCACAACCGATATCACATGGTGCATCCTCACCAAGCAGCTTATTGCAGTTTAATTTTTTCATTCTCTGTCACATGGACGCCCTTTAG | 606 | 44.72 | MEAPDGSSSDKKWIPLESNPDVMNQFLWGLGLPDNEAECFDVYGLDDELLEMVPKPVLAVLFLFPMPEETEEEKMLDGSTKKTPSDKVYFLRQTVGNACGTIGLLHALGNVTSDIKLVEGSYLDRFFKSTASMDPWERAAFLEKDREMEAAHSIAAVAGDTEARELYELDGRKAQPISHGASSPSSLLQFNFFILCHMDAL | 201 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi8g00511 | 201 | FunFam | - | 8 | 76 | - | - | |
| Busi8g00511 | 201 | Pfam | Ubiquitin carboxyl-terminal hydrolase, family 1 | 13 | 186 | IPR001578 | GO:0004843(InterPro)|GO:0006511(InterPro) | |
| Busi8g00511 | 201 | Gene3D | - | 7 | 194 | IPR036959 | GO:0004843(InterPro)|GO:0006511(InterPro) | |
| Busi8g00511 | 201 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 93 | 110 | IPR001578 | GO:0004843(InterPro)|GO:0006511(InterPro) | |
| Busi8g00511 | 201 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 53 | 65 | IPR001578 | GO:0004843(InterPro)|GO:0006511(InterPro) | |
| Busi8g00511 | 201 | PRINTS | Ubiquitin C-terminal hydrolase (C12) family signature | 15 | 32 | IPR001578 | GO:0004843(InterPro)|GO:0006511(InterPro) | |
| Busi8g00511 | 201 | CDD | Peptidase-C12-UCH-L1-L3 | 13 | 190 | - | - | |
| Busi8g00511 | 201 | PANTHER | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | 9 | 189 | IPR001578 | GO:0004843(InterPro)|GO:0004843(PANTHER)|GO:0005737(PANTHER)|GO:0006511(InterPro)|GO:0016579(PANTHER) | |
| Busi8g00511 | 201 | SUPERFAMILY | Cysteine proteinases | 11 | 190 | IPR038765 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi8g00511 | K05609 | ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12] |