AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g00555 ATGGAGTTCACGGAAGCTTTTAAGCAGACAGGCCCTTGTTGTTTCTCGCCAAATGCCCGTTATCTTGCAGTTGCAGTAGATTATCGTTTGGTGATTCGAGATGTCCTCTCACTCAAGGTTGTGCAGTTGTTTTCCTGCTTGGATAAGATAAACTATATTGAATGGGCTCTTGATTCCGAATACATACTCTGTGGTCTGTATAAAAGGCCTATGATACAGGCATGGTCACTGACGCAACCTGAATGGACATGCAAAATAGATGAAGGTCTTGCTGGGATTGCATATGCAAGGTGGAGCCCTGACAGTCGCCACATACTTACTACATCAGATTTTCAGTTGCGACTAACAGTTTGGTCACTGGTGAACACTGCCTGTGTTCATGTGCAATGGCCGAAGCATGCTTCTAAAGGAGTTTCTTTTACCCAAGATGGAAAGTTTGCTGCAGTTTGCACAAGACGTGATTGCAAGGACTACATTAATCTACTATCTTGTCATACATGGGAGATAATGGGTGTTTTTCCTGTTGACACATTGGACTTGGCAGATATTGAATGGTCACATGATGATAGTGCTATAGTCATCTGGGATTCCCCTCTTGAGTACAAGGTTCTGATATACTCCCCAGATGGGAGGTGTCTATTTAAGTATCTAGCATATGAAAGTGGATTGGGTGTGAAGAGTGTTGCATGGTCTCCATGTGGCCATTTTCTTGCTGTTGGTAGTTATGATCAGATGCTAAGGGTATTGAATCATCTGACCTGGAAAATATTTGCTGAATTCATGCACCTATCCACTGTTCGCGGTCCTTGTGGAGCTGCTGTTTTCAAGGAGGTGGATGAGCCTCTGCAACTTGACGTGTCTGGATTATGCTTGACGGACAATTTTATACAAGGCAATTCTGATGCGCCAGAGGGACATTTTAGAGTCAGGTACAAGGTAATGGAGTTACCTATCAACTTGCCATATCAGAAACCACCTGCTGACAAACCAAACCCAAAACAAGGCATCGGTCTAATATCATGGAGCTGCAATAGCCAGTACCTCTTTACTCGCAATGATAGCATGCCAACTGTTCTATGGATATGGGACATCTGCCATCTCGAGCTTGCTGCCATCTTGATACAGAAAGAGCCTATTCGGGCAGCAGCATGGGACCCAACATGCTCACGGCTCGTTCTTTGTACAGGGAGCCCTCATTTGTACATGTGGACACCCTCTGGTGCTTACTGTGTGAATGTTCCATTGCCACAGTTTAGTGTTGTTGATCTGAAATGGAATTCTGATGGGAGTTGCCTTCTCGTCAGGGATCGGGAGTCATTCTGTTGTGCTGCAGTCCCTATGATTCCAGATTCTAGTGAAGATAGTTCGGATGATTAA 1377 44.59 MEFTEAFKQTGPCCFSPNARYLAVAVDYRLVIRDVLSLKVVQLFSCLDKINYIEWALDSEYILCGLYKRPMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLVNTACVHVQWPKHASKGVSFTQDGKFAAVCTRRDCKDYINLLSCHTWEIMGVFPVDTLDLADIEWSHDDSAIVIWDSPLEYKVLIYSPDGRCLFKYLAYESGLGVKSVAWSPCGHFLAVGSYDQMLRVLNHLTWKIFAEFMHLSTVRGPCGAAVFKEVDEPLQLDVSGLCLTDNFIQGNSDAPEGHFRVRYKVMELPINLPYQKPPADKPNPKQGIGLISWSCNSQYLFTRNDSMPTVLWIWDICHLELAAILIQKEPIRAAAWDPTCSRLVLCTGSPHLYMWTPSGAYCVNVPLPQFSVVDLKWNSDGSCLLVRDRESFCCAAVPMIPDSSEDSSDD 458
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g00555 458 Gene3D - 319 443 IPR015943 GO:0005515(InterPro)
Busi8g00555 458 Gene3D - 8 134 IPR015943 GO:0005515(InterPro)
Busi8g00555 458 Pfam WD domain, G-beta repeat 211 248 IPR001680 GO:0005515(InterPro)
Busi8g00555 458 SUPERFAMILY TolB, C-terminal domain 206 438 - -
Busi8g00555 458 SUPERFAMILY WD40 repeat-like 13 262 IPR036322 GO:0005515(InterPro)
Busi8g00555 458 Gene3D - 135 279 IPR015943 GO:0005515(InterPro)
Busi8g00555 458 PANTHER WD REPEAT PROTEIN 8-RELATED 1 446 IPR052778 GO:0005815(PANTHER)|GO:0072686(PANTHER)|GO:1990810(PANTHER)|GO:1990811(PANTHER)
Busi8g00555 458 SMART WD40-4 209 250 IPR001680 GO:0005515(InterPro)
Busi8g00555 458 SMART WD40-4 77 119 IPR001680 GO:0005515(InterPro)
Busi8g00555 458 SMART WD40-4 366 404 IPR001680 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g00555 K25164 WD repeat-containing protein WRAP73