AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g01126 ATGGATTACCCCAAGAACGGCATCGGAAACCTGGCTATTGTGTCTCTCCTCTTCGCTGGCGTTCTATACGTCTCCATCACAAGTCCCTCCATCTTCAAGCCATTGTTTCCAAGCCAGAACCCCAGATGTTCATCGTTATCCAACACGAGCGTCACGACTTACGATCACAGGGATGAGCTTGAGAAAGTTCTTGAAAGTGCTTCAATGCCGAACAAGACTCTGATAATCGCTGTGGTGAACAAAGCTTACGTTGAAGGGGACAAGCCGATGCTCGACATTTTCCTCGACGGTTTCTGGCACGGCGAAGACACCCGGTGGTTGGTTAATCACCTCCTGATCGTGGCCGCCGACCAAACGGCTTTCGACCGCTGCAATTTTCTCCGGCTACATTGCTACAGGCTTCAAACGGACGGTGTGGACTTCGGCGGCGAGAAGCTTTACATGACTGCAGATTTTATAAAGATGATGTGGAGGAGAACTCAAGTGCTTGCCGAAGTACTCAAGCGGGGCTACAGCTTCATCTTCACCGACATGGACATAATGTGGCTAAGAAACCCATTTGTGAGGCTAAGTCGCAACGGAGACGAAGATCTCCAAATCAGTACGGACAAGTTCAATGGCAATATAAGATCAGAAGATCAGCTGATCAATACTGGTTTCTACTTTATTCGATCAAACAACAAGACCATCAAATTGTTTGATTCTTGGTATGCAAAGAAAGACAACTCTACAGGAATGAAAGAGCAGGATGTGTTGATGAAGATGCTTCATGAGGGTGTTTTCAGGCAACTGGGCCTCAAGGTGAGGTTCTTGGACACAATGTACTTCAGTGGGTTCTGCGAAGATAGCAGAGACTTTAGAGCAGTGACCACTGTGCATGCAAACTGTTGTCGGAGTATATTTGCCAAGGTCATTGATCTAATGGCTGTGCTTCATGATTGGAAGAGATTCAAGGGCGCCGCCGCTAATGAAACGTCGAGTATCCGGTGGTCACCGCATAACGGTTGTCATAGGGCATGGAGACATCCTTAA 1032 47.58 MDYPKNGIGNLAIVSLLFAGVLYVSITSPSIFKPLFPSQNPRCSSLSNTSVTTYDHRDELEKVLESASMPNKTLIIAVVNKAYVEGDKPMLDIFLDGFWHGEDTRWLVNHLLIVAADQTAFDRCNFLRLHCYRLQTDGVDFGGEKLYMTADFIKMMWRRTQVLAEVLKRGYSFIFTDMDIMWLRNPFVRLSRNGDEDLQISTDKFNGNIRSEDQLINTGFYFIRSNNKTIKLFDSWYAKKDNSTGMKEQDVLMKMLHEGVFRQLGLKVRFLDTMYFSGFCEDSRDFRAVTTVHANCCRSIFAKVIDLMAVLHDWKRFKGAAANETSSIRWSPHNGCHRAWRHP 343
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g01126 343 PANTHER EXPRESSED PROTEIN-RELATED 38 336 IPR044821 -
Busi8g01126 343 Pfam Nucleotide-diphospho-sugar transferase 107 304 IPR005069 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g01126 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr3:21436006 Busi8g01126 Busi-Chr8:17758397 dispersed
Busi Busi-Chr11:49756938 Busi8g01126 Busi-Chr8:17758397 transposed
Busi Busi-Chr2:1093844 Busi8g01126 Busi-Chr8:17758397 transposed
Busi Busi-Chr12:18402580 Busi8g01126 Busi-Chr8:17758397 wgd