AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi8g01151 | ATGGCTGAATCGGTCGAATTACCGAATCGGTTGGCGATTCTTCCGTTTCGGAATAAGGTGCTGTTGCCTGGTGCGATAATTAGAATTCGATGCACTTCACTTAGTAGTGTAAAATTGGTGGAGCAAGAGCTGTGGCAAAGGGAAGAGAAGGGTTTGATTGGTGTCCTGCCTGTTCGAGATTCTGCTGACACTGCATCTGTCAGTCCCATGTTATCTCCAGGTATGGTGACTGATAGTGGAGATCGAAGTTCAAAAGTTCCAGTCGCCACATCGGAAACTCATAAGCAGGATGGAAAAAATCAGCAGGAACTAATTCACTGGCACACGAGGGGAGTTGCTGCTAGAGCTTTACATCTATCAAGAGGGGTGGAGAAACCAAGTGGGAGGGTCACATATATCGTCGTCCTTGAAGGTTTGTGCAGGTTCAGTGTGCAAGAACTTAGTGCTAGGGGAACATATCATGTTGCACGGATTTCCCGTCTTGATATGACAAAGGCTGAGATGGAGCAAGCTGAACAAGACCCAGATCTTACAGCACTGTCTCGTCAATTTAAAGCTACTGCAATGGAGCTGATCTCTGTTCTTGAGCAGAAACAGAAAACTGTAGGAAGGACAAAAGCTTTTCTGGACACTGTTCCTGTGCACAGATTGGCAGATATATTTGTTGCTAGCTTTGAAATAAGCTTTGAGGAGCAGCTGTCTATGCTAGATTCAGTTGACTTGAAAGTAAGACTTCAAAAAGCTACCGAGTTGGTTGACAGACATTTACAGTCAATCCGTGTGGCGGATAAGATAACACAGAAGGTTGAGGGACAGTTGTCAAAGTCACAAAAAGAATTTCTTTTGCGTCAGCAGATGAGGGCTATAAAAGAGGAGCTTGGGGACAATGATGATGATGAGGATGATATTGCAGCCTTGGAAAGAAAGATGCAAAGTGCTGGAATGCCTCCAAATATTTGGAAGCATGCTCAAAAGGAATTAAGGAGACTTAGGAAAATGCAACCTCAGCAACCTGGGTATAGTAGTTCTCGTGTTTATCTGGAGCTTCTTGCTGATCTGCCTTGGCAGATGGCAACTGAAGAACGTGAACTGGACCTTAGGGCTGCAAAAGAGCGTCTTGACAGTGACCATTTTGGATTAGTCAAAGTTAAGCAACGAGTAATTGAGTATCTAGCTGTTCGCAAGCTTAAACCTGATGCTAGAGGCCCAGTTCTCTGCTTTGTTGGCCCACCAGGTGTTGGGAAAACATCTTTGGCATCATCCATAGCTGCTGCGCTGGACAGAAAATTTGTACGGATTTCTCTTGGCGGTGTCAAGGATGAGGCTGATATTAGAGGGCATCGGAGAACATATATTGGAAGCATGCCAGGACGGCTTATTGAGGGATTAAAGAGAATAGGTGTGTGCAATCCAGTGATGCTTCTTGACGAGATTGACAAAACTGGTTCTGATGTTCGTGGAGATCCAGCTTCAGCACTACTGGAGGTTCTTGACCCAGAGCAGAACAAAGCATTCAATGATCACTATTTAAATGTTCCTTTCGACCTATCAAAGGTTATTTTTGTGGCAACTGCAAACAGGATGCAGCCTATCCCACCACCACTCTTAGATAGAATGGAGGTTATTGAGCTACCTGGATACACACCTGAAGAAAAGATAAGAATAGCCATGAAGCATTTAATACCACGAGTTCTGGATCAGCATGGATTGAGTTCTGAACTCCTCCAAATTCCTGAGGATGTGGTTAAACTTATCATTCAGAGATATACAAGAGAGGCTGGTGTAAGAAACTTGGAAAGGAACTTAGCTGCCTTGGCTCGTGCTGCAGCTGTCAGAGTTGCTGAACAGGAACTTGTGGTCCCGCTCAGCAAAGGTGTGCAGCAGATGGTGTCACCACTGCTGGATGAAAGACTTGCGGATGGAGCTGAAGTGGAGATGGAAGTTATTCCAATTGGTGTTGATAATCATGAGATTTCAAATGTTTTCAGGAATACCTCAGTTATGGTTGTTGATGAGACTATGCTGGAGAAAGTACTAGGGCCTCCAAGGTTTGATGACAAAGAAGCTGCAGAACGGGTTGCAAGTCCTGGAGTAGCTGTTGGGCTTGTTTGGACCTCCTTTGGTGGGGAGGTTCAGTTTGTTGAGGCTACGACAATGGTAGGAAAGGGTGATTTACATCTTACAGGGCAACTTGGTGATGTTATAAAGGAATCTGCTCAGATTGCACTAACGTGGGTAAGAGCAAGGGCTGCAGATCTTAAGCTGGCAGCTTCTGGGAAGATAAATTTACTGGATGGGATGGATATTCATATTCATTTTCCAGCAGGAGCTGTACCTAAGGATGGGCCCTCTGCTGGTGTGACACTTGTAACATCGCTTGTTTCATTATTCAGTCAGAAAAGAGTACGAGCAGACACAGCAATGACTGGAGAGATGACTCTGAGGGGCCTTGTTTTACCTGTTGGCGGTATCAAGGATAAGATATTGGCAGCACATCGCTATGGTATAAAAAGAGTTATCCTTCCTGAGAGGAACTTGAAAGACTTAGTTGAAGTACCATCATCTGTCCTTTCCAACCTTGAGATATTGCTGGCAAAGCGTATGGAAGATGTTCTGGAACAGGCTTTTGATGGTGGGTGTCCATGGAGACAAGACTCAAAGTTATGA | 2667 | 44.73 | MAESVELPNRLAILPFRNKVLLPGAIIRIRCTSLSSVKLVEQELWQREEKGLIGVLPVRDSADTASVSPMLSPGMVTDSGDRSSKVPVATSETHKQDGKNQQELIHWHTRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSARGTYHVARISRLDMTKAEMEQAEQDPDLTALSRQFKATAMELISVLEQKQKTVGRTKAFLDTVPVHRLADIFVASFEISFEEQLSMLDSVDLKVRLQKATELVDRHLQSIRVADKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDIAALERKMQSAGMPPNIWKHAQKELRRLRKMQPQQPGYSSSRVYLELLADLPWQMATEERELDLRAAKERLDSDHFGLVKVKQRVIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIEGLKRIGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKAFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEKIRIAMKHLIPRVLDQHGLSSELLQIPEDVVKLIIQRYTREAGVRNLERNLAALARAAAVRVAEQELVVPLSKGVQQMVSPLLDERLADGAEVEMEVIPIGVDNHEISNVFRNTSVMVVDETMLEKVLGPPRFDDKEAAERVASPGVAVGLVWTSFGGEVQFVEATTMVGKGDLHLTGQLGDVIKESAQIALTWVRARAADLKLAASGKINLLDGMDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLVEVPSSVLSNLEILLAKRMEDVLEQAFDGGCPWRQDSKL | 888 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi8g01151 | 888 | FunFam | Lon protease homolog | 304 | 353 | - | - | |
| Busi8g01151 | 888 | Pfam | ATPase family associated with various cellular activities (AAA) | 405 | 542 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Busi8g01151 | 888 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 696 | 875 | IPR020568 | - | |
| Busi8g01151 | 888 | SUPERFAMILY | PUA domain-like | 10 | 253 | IPR015947 | - | |
| Busi8g01151 | 888 | Hamap | Lon protease homolog 2, peroxisomal [LONP2]. | 3 | 888 | IPR027501 | GO:0004252(InterPro)|GO:0006515(InterPro) | |
| Busi8g01151 | 888 | Gene3D | - | 172 | 297 | - | - | |
| Busi8g01151 | 888 | Gene3D | - | 545 | 684 | - | - | |
| Busi8g01151 | 888 | Coils | Coil | 289 | 309 | - | - | |
| Busi8g01151 | 888 | Pfam | Lon protease (S16) C-terminal proteolytic domain | 670 | 876 | IPR008269 | GO:0004176(InterPro)|GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Busi8g01151 | 888 | PIRSF | Lon-proteas | 654 | 879 | IPR004815 | GO:0004176(InterPro)|GO:0005524(InterPro)|GO:0006508(InterPro) | |
| Busi8g01151 | 888 | PIRSF | Lon-proteas | 1 | 636 | IPR004815 | GO:0004176(InterPro)|GO:0005524(InterPro)|GO:0006508(InterPro) | |
| Busi8g01151 | 888 | FunFam | Lon protease homolog 2, peroxisomal | 366 | 544 | - | - | |
| Busi8g01151 | 888 | Pfam | Lon protease AAA+ ATPase lid domain | 567 | 617 | IPR054594 | - | |
| Busi8g01151 | 888 | SMART | lon-5 | 10 | 254 | IPR003111 | - | |
| Busi8g01151 | 888 | FunFam | Lon protease homolog 2, peroxisomal | 690 | 881 | - | - | |
| Busi8g01151 | 888 | ProSiteProfiles | Lon N-terminal domain profile. | 11 | 256 | IPR003111 | - | |
| Busi8g01151 | 888 | Gene3D | - | 1 | 161 | IPR046336 | - | |
| Busi8g01151 | 888 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 353 | 619 | IPR027417 | - | |
| Busi8g01151 | 888 | Gene3D | - | 695 | 880 | IPR014721 | - | |
| Busi8g01151 | 888 | MobiDBLite | consensus disorder prediction | 65 | 100 | - | - | |
| Busi8g01151 | 888 | CDD | RecA-like-Lon | 366 | 547 | - | - | |
| Busi8g01151 | 888 | MobiDBLite | consensus disorder prediction | 65 | 95 | - | - | |
| Busi8g01151 | 888 | Pfam | ATP-dependent protease La (LON) substrate-binding domain | 11 | 254 | IPR003111 | - | |
| Busi8g01151 | 888 | ProSitePatterns | ATP-dependent serine proteases, lon family, serine active site. | 781 | 789 | IPR008268 | GO:0004176(InterPro)|GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Busi8g01151 | 888 | Gene3D | - | 366 | 544 | IPR027417 | - | |
| Busi8g01151 | 888 | FunFam | Lon protease homolog 2, peroxisomal | 172 | 297 | - | - | |
| Busi8g01151 | 888 | Gene3D | - | 305 | 353 | - | - | |
| Busi8g01151 | 888 | NCBIfam | endopeptidase La | 13 | 876 | IPR004815 | GO:0004176(InterPro)|GO:0005524(InterPro)|GO:0006508(InterPro) | |
| Busi8g01151 | 888 | SMART | AAA-5 | 401 | 546 | IPR003593 | GO:0016887(InterPro) | |
| Busi8g01151 | 888 | ProSiteProfiles | Lon proteolytic domain profile. | 693 | 878 | IPR008269 | GO:0004176(InterPro)|GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Busi8g01151 | 888 | PANTHER | ATP DEPENDENT LON PROTEASE FAMILY MEMBER | 6 | 885 | IPR027065 | GO:0004176(InterPro)|GO:0004252(InterPro)|GO:0005524(InterPro)|GO:0005782(PANTHER)|GO:0006625(PANTHER)|GO:0016485(PANTHER)|GO:0030163(InterPro) | |
| Busi8g01151 | 888 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 409 | 428 | - | - | |
| Busi8g01151 | 888 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 778 | 797 | - | - | |
| Busi8g01151 | 888 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 831 | 849 | - | - | |
| Busi8g01151 | 888 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 696 | 712 | - | - | |
| Busi8g01151 | 888 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 808 | 827 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi8g01151 | K01338 | ATP-dependent Lon protease [EC:3.4.21.53] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr6:1420231 | Busi8g01151 | Busi-Chr8:18130539 | dispersed |