AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Busi8g01184 ATGGTTCCTCAAGGGATCACAGAAGAACAAAGGACTCGAATAACCCAAAATTTCAGAGCAGCAAAGGCACTTCTTGCCCGCAAGAGACCTCGTGACACCCTAAAAATCCACAATCAAAGTCCGCAAGATAGGGATGCAAATAGAATCACCTCGCCGGGGCCTGTGCCCGGCATCCATAGATATCCTCTTTCAGAGATACCGATAAACACACCATCCAGAATTGCTAGCAAGGGCTTGAGGTTACTGGAGGACAAACATGTTAAATCATGTCCTGGGAAAATGTTAGTCAAGAACGACTGTGACAATGTGAATGGACTGACAAAGGGAGCTGCTATGGAGGGAAGAGTTAGAGCACCATTTACTTGCACTCCGACGAGTCAGTCAGGACAGTCTAGTTTAAGTGAACCACTCTCATTGTCTAGTCTTCTGGACGAAGCTTTTGATGAGTCCATTTTGACAGAAATTGATGCTTTATGCGATAAAGCGGCAGCAAAGGCAGAAGGGGAGGGATCATGCATTGGTGTTTCTGTGGGAAATCAGTGCAATGAAAGTAGTAGTGGGGATGATCAAAGTTATTTGGAGTCTGCTGCTGTGAAGAAGCTATCAGACCACGAGGAAAAGCTGGACCATTTAGAATCAGCAACAGAAGGGTCAGGTATTTCTGGGATCATACAGTGTGGGAGTATGCCAAAACCGAATTTGGATTATTTACAGTCTTTGAATGACAAGCAAAAGGAGGCAGCTTGTAGTGATATTTCAGTTCCTTTCATGATTACCTCTACAATGGTTGGCCGAATATTAGTCCTTCTCAATGAGATGCATTCGCGTGCTTTCAATGAATCTTTTGTCATTGGTCCATCCCAAATTCTGGCTATGACCTTCACAACAGCAGCTGCATCTGAGATGAGAGATCGAATTGGAGCCGTGGCAGGGAAGAAAGTGGCGAAGGAACTTACAATCAGCACCTTGCACTCATTTTCTTTGCAACTTTGTTGTTTTCATGCAGAGATGTATGGATGTTATAAGCTCAGGCTCTTAATTATTAACCTCTTAACGTTAATTTTTATAAAGAGTAATGAATTCTCCATCATTGTTGGTGCCCCATTAGAAGCATTCATTTTGCAGTTACCACCAGTTTTGGTGATTTTCCTATCAAAGAAGTGCTGA 1167 43.1 MVPQGITEEQRTRITQNFRAAKALLARKRPRDTLKIHNQSPQDRDANRITSPGPVPGIHRYPLSEIPINTPSRIASKGLRLLEDKHVKSCPGKMLVKNDCDNVNGLTKGAAMEGRVRAPFTCTPTSQSGQSSLSEPLSLSSLLDEAFDESILTEIDALCDKAAAKAEGEGSCIGVSVGNQCNESSSGDDQSYLESAAVKKLSDHEEKLDHLESATEGSGISGIIQCGSMPKPNLDYLQSLNDKQKEAACSDISVPFMITSTMVGRILVLLNEMHSRAFNESFVIGPSQILAMTFTTAAASEMRDRIGAVAGKKVAKELTISTLHSFSLQLCCFHAEMYGCYKLRLLIINLLTLIFIKSNEFSIIVGAPLEAFILQLPPVLVIFLSKKC 388
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Busi8g01184 388 Gene3D - 233 349 IPR027417 -
Busi8g01184 388 PANTHER UVRD - RECB - PCRA DNA HELICASE FAMILY MEMBER 234 348 IPR000212 GO:0000725(PANTHER)|GO:0003677(InterPro)|GO:0003678(InterPro)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0043138(PANTHER)
Busi8g01184 388 MobiDBLite consensus disorder prediction 28 54 - -
Busi8g01184 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 335 IPR027417 -
Busi8g01184 388 Pfam UvrD-REP helicase N-terminal domain 259 334 IPR014016 GO:0005524(InterPro)
Busi8g01184 388 MobiDBLite consensus disorder prediction 28 42 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Busi8g01184 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Busi Busi-Chr8:18728961 Busi8g01184 Busi-Chr8:18982172 proximal