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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati1g00032 GTATGTTTTATGGGCCCTATCTCATCTAATCATTTCACAGACCTCCTCCACCTCCACCTCCATCTCCTCCGATCGCCGGTGAAGATGCGATTGGTATTATTTGGTAGATCAAGGAGAAAACCGCTCTCTCTCCATTGCCTCCTCATCGCATCTGCAGCTTTCACCGGTATCGGCATCTTACTCCTCACTCTCCGTTCTCTCGACGATCCATCAACATCCTCCTCCCACATCACCACCACCCAAACCAAAACAACTGCAACTGCAACCAAAGGATGCGCTACCGTTGAAGAGATGGGAGACGTTTTCCGAGGTGGATTCCTCCAGCAGACTCTCCACGTTCGAGATGCCATCCGACGTCACTTCGATCTTAACGGTGCTGCTAGAATCCGAAGTCTCCCTCCAGAGGAGTTTTGCAAACAAAGTTTCGTGATAGCAAAAGCATCAGAGGCAGGTTTTGGAAATGAAATGTACAAGATCCTAACGGCAGCAGCTTTGAGTGTAATGTTGAACCGGTCACTCATAATCGGACAAACCAGGCATATTGATTCAAGTATTATGTTTTCAGTGCACTCCACACCAGTTAACCAAATGGACATTCAGGAGGCAGAGCATTTTCAATGA 621 47.67 MGPISSNHFTDLLHLHLHLLRSPVKMRLVLFGRSRRKPLSLHCLLIASAAFTGIGILLLTLRSLDDPSTSSSHITTTQTKTTATATKGCATVEEMGDVFRGGFLQQTLHVRDAIRRHFDLNGAARIRSLPPEEFCKQSFVIAKASEAGFGNEMYKILTAAALSVMLNRSLIIGQTRHIDSSIMFSVHSTPVNQMDIQEAEHFQ 203
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati1g00032 203 PANTHER EXPRESSED PROTEIN 75 177 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati1g00032 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr1:238864 Cati9g01810 Cati-Chr9:19106251 dispersed
Cati Cati-Chr1:238864 Cati1g00032 Cati-Chr1:238864 proximal