AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati1g00074 AGGCCCAAGTGCATTACCAGCCCATGCTTCATTACGGATTTACAGAGTAGGTTCTTCACCGATTGGAAAAAGGAGCTCTCAAATTCTCCTTTCCATCACTCATCGACCATCGCAAAGCTGTGGATTGTGATTTCATCAACCTCTGATTCTGGAATCTGATAAGGAAAAGCATCAGAAATTGGAACTTCGATTTTTACATTTTTGTGTCGATTTTTTTGGAAGTTGATCCTGTGATTTGTGGTGCATCCTGCAGAACACTAGCCTTTCTCTCAGATGGCAACTGCTATTCTCAAGAAAACCTTCAATTCCTTAAACCCTAACGATATAATCCTCCGATCCCTATCTTCCTATGCTACAGCTGCTGCAAACAGCATCCCACAACCTCAGCCTGACGACACGCCTTCTTCGTTCACCTTCTCACCGGATCAGAATGACGACAGTAAAAACATCAGCAAGGGTAGCAGCGGTGCCAGTGACGAGATATACATCAAGTCTAAGAAACCACCGCCTTCGGACTCAGTGACCATGCCGATGTCGTTCATGACTGGATCGATCGTCGGGAAGAGGTTCTATAAGCAAGTGACGACCAGAGCAGCCGACGATGGGAACGGTTGGTCGGTGATGCTTGATTACCGGACACTCAAAACCCCTTCTAAGAGGCCTCTTAAATGCACTACTCTCGCTCTTGCCAAAGCTATTGCTGCTGAATGGGACTACCAGCTTTCAGATGGAATTAGGCCCTTCACAATGCCTCTAATGAAACTTGCATGTACTGCTTTGGAAAGAGTTCCGCTCACTAGGCCAAAGATTATCGAGAATTTATTGGGAAGGTTTCATCAAGATTTGGTCTTTTGTCGTGCCCCAGATGATAATGTGTTAACAAGTGGTGTCCATGAACTACAAGTGAAGAAAATTGATCCTCTACTTGAGTGGGTAGAATCCGAGTTTGGCTTCAAACCCGTCGTGTATTCCAGTTTCTTCGGGGGCAAGCAGGAGGATGGTTTCGTAGATGCCATAAAAACCCTTCTTAAGAAAACCAATGATTGTGAACTAGCGGCAATTGATGCACTTGCGTCGGCATCACATTCGTTAATAATTTCCATTGCGATCTTTCGTGGGAAACTACAGATCGAGGAGGCAATTGAATTGATTAGACTCGAAGAAGATATGCAGGTCGAAAAGTGGGGTTTGGTAGAAGGCGGCCATGATCTTGACGTCGCAGACCTCAAGGTCCAGATCTCGTCTGCTGCTGTTTTCCTCGGACTTACGAAAAGGTTCGCAAATGGCGTTTAGTATTTCTGTTCAATTTAACTTACTCGATTAGATTATTTCAAAAGCATGCTTGAATATTAGCTATTTACCTACACCATCTTCTTCTACCCACTAGGCTCCACTTTATCAACGTTGTTTACAATTATTTCTCATAGGTGAACAACTGTTTTACTCTTCCGAGTAGAGGTTAGGTCTGCTTACATCCAACCGTCCACAGAACCAACCTCTGGGTGGGATACAGTGGGCTAGTTTGGTTTTGGTTTTGGTTTATAATAAGAGGTGAACAATCTTTAAATTACAATTTTTTTAGTTCTGCAACTTGGCTTATAAGTAAAATGTGCTTTTTATGCAAATTATGTTGGTGCTCGCCTTTTGTATTTAGGGTTTAGGGTTTAGTATTCCTACCTTAAAATATAGGGGACCTTCATAGTTCATAGTAATTTTGTTGTGAAAGTTAGTCTTTTGTATCTTTACAATGTTTTGCTATGAAGTTTTTTATGGTCTCACGAGTCACACATGATCCCAACCCCATTGCTAAAAGCTACATAACCACTGCCTACGCTCATATTCTCCAAATTTTTTTACGTGCCCTTTCATGGTTCCACGCATCTGAACCCGATGGTCGATTACTTTCATCCTCGGGTGCATGTCACTGTAGTGGGATAATTGTTGTTAGAGTAAATTATGATTTTCTTCCCCATGGTTTAGAAATTATGATTTTCGTCCCCAAGGTTTGTAATTAATTGCTATTATCGTCTTCATAATTTATAATTTATTGCTGATTTGATCACTGTGGTTTACATTTCTTCATTATTTTGGTCTCTTATACTTAAAGGTAGGAATTAGCCCATACTTAAAGGTAGGAATTAGCCCAGGGACGAAAATAGAAATAAATGGCAAACCATAGGGACAAAAATGGCAATTCTAAACCACAGGGACTAAATTGTAATTTACTCTTCTTGTTATTTTATCGGGCATTGATGCATCCTGATGTTCTTCTACTTATATCTAAGTGTTTTTATTGTTTGTGCTCACGGGGATTAATTTCGATAAAATGATGGCTGAACTCGAAAGGTCAAAAGATTAAAAGAGAACTCTTGCACACAAATTTAGTTGATCAAAGTGAATCAATACAAATTTAACCAGAGGCAAAAGAGTTGGTCAAAATCAAGTAGCAGCCCGAGTCAAACGAACCCACACACCCAAGCTAAGTAAACCCGAGCCGAATTCTCCAACAAAGCCGAGGCCAAGGCCGGTTTTGATTTTATGACGTCTTTCTGGAGTCTTTAAGGTGTCCTCTCTTGCGAATCGCAAGACAAACCTGTAGCCACCAAGCTTCGATAGCCGACTCTGGTACCATGCTAGCGAAAGCCCACAAGATCGAATGCGGCCAATATGGTGTGCATCGTGGTTCATAGCCAATATAGCGTATTGCGGCTTGAGCATAACCGTCTGGCGATGCAACAAAGAAGGACGACCTTTTGAGTGAAGACATCTTTGTTGCCACGTACAACGGTACCTGTAAAACATGTTGCAGATACGATCAACAAGAATATATTGTATAATAACATGAAACCTTTCTAAGTTTTTCTCTAAAAGAACCTTTATAGATAAAGATATGGTCTTTCACTGGAACAAAATAGGTTTTATAGACGCATAGTTGTCTTTGAATGTACAAATACATTATTAATAAATACCTTTAAGTTTCCATGACCAAGAACTATGCCCGCTTGAAACCGTTATGATATTTAGTTAGTTTAAAACTAAAATCCATTTTAC 3051 40.61 MATAILKKTFNSLNPNDIILRSLSSYATAAANSIPQPQPDDTPSSFTFSPDQNDDSKNISKGSSGASDEIYIKSKKPPPSDSVTMPMSFMTGSIVGKRFYKQVTTRAADDGNGWSVMLDYRTLKTPSKRPLKCTTLALAKAIAAEWDYQLSDGIRPFTMPLMKLACTALERVPLTRPKIIENLLGRFHQDLVFCRAPDDNVLTSGVHELQVKKIDPLLEWVESEFGFKPVVYSSFFGGKQEDGFVDAIKTLLKKTNDCELAAIDALASASHSLIISIAIFRGKLQIEEAIELIRLEEDMQVEKWGLVEGGHDLDVADLKVQISSAAVFLGLTKRFANGV 339
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati1g00074 339 PANTHER ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2-ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR 20 332 IPR011419 GO:0005739(PANTHER)|GO:0033615(PANTHER)|GO:0043461(InterPro)
Cati1g00074 339 MobiDBLite consensus disorder prediction 30 85 - -
Cati1g00074 339 SUPERFAMILY ATP12-like 85 329 - -
Cati1g00074 339 Gene3D ATP12 ATPase 159 334 IPR023335 -
Cati1g00074 339 MobiDBLite consensus disorder prediction 30 67 - -
Cati1g00074 339 Pfam ATP12 chaperone protein 97 222 IPR011419 GO:0043461(InterPro)
Cati1g00074 339 Gene3D - 94 156 IPR042272 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati1g00074 K07556 ATP synthase mitochondrial F1 complex assembly factor 2