Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati1g00082	CGTGTTTTGACCTACATCATCTGCCAATCAGCTAACTACGAAATTTGTTATTTCTTATTAATTGCAAGCTTTTGCCATTAATGGAAGTTTTAAACGTTTATGGAGTTTAACAACTAAGAAGCAATCTATATTTAGAAAAGTATTTGATCTTTGAAGTAGTTGTTAATTTGTTATTATAAATAAGGTTTTTTCAGTTCAATTTTGAGAGTTTTGCTTTTGGATCATCACAATTTGCTTTCAATAAGTTGTTTACTGGAAGAGAATTTGATCTTTGAAGTAGTTTAGTTTCCATTATAAATAAGGTTTTTGAGTTCAATTCTGAGAGTTTTGCGTTTGGATCATCACAATTTGCTTTCAACAAGTTGTTTACTGGAAGAGAATTTGTTTTCAAATATTTGAAATTTGTAGATTGATCATTGATTAAGTAATGGGGGGAAAGAGTTCAAGGGAAGAAGGGGCGAGATATAGGCATTCGTCATCGTTTCAATCGACTTCATCTTTTTCTGGAAATCAGTATGGTGGTGGTTATCCTCCTCAGCCATCTTATTCTTTTCCGGCACAAGGAGATGAAAATTACCCTGCTCCGGAGGTGTATCCACAGCAACAGTATGGTGCACCTGCTGCTCCTGCTGCTGCCCCATCGTATGGAGCCCAGCCTCATAGGCCACAGAAGAGGCTTGATAAGAGATATTCAAGAATTGCAGATAGTTACAACTCTTTGGAACAGGTGACCGAGGCTCTTGCACATGCTGGGCTCGAGTCTTCCAACCTCATTGTTGGTATCGACTTCACTAAGAGTAATGAATGGACTGATAGTCTAAATCCATACGAACAAGCCATATCTATCATTGGGAAAACGTTGGCAGCTTTTGACGAGGATAACTTGATTCCTTGCTATGGCTTTGGAGATGCATCGACCCATGATCAAGATGTTTTCAGCTTTTATCCTGAGGATAGGTTCTGTAATGGATTTGAGGATGTCATGAGTAGATACAGAGAAATTGTCCCTCATCTAAAGCTTTCAGGACCGACGTCATTTGCCCCTGTAATTGAACAGGCCATGACAATTGTTGAAAAAAGTGGGGGCCAGTATCATGTGTTGTTAATCATTGCTGATGGGCAGGTAACAAGAAGTGTGGATACCGAGCATGGTCAATTGAGTCCACAAGAACAAAATACCGTAGATGCCATAGTCGAAGCAAGCAAGCTTCCGCTATCGATTGTATTAGTGGGGGTTGGAGACGGGCCTTGGGACATGATGAAGGAATTTGATGATAATATCCCTGACCGCGACTTTGATAATTTCCAGAACCATGAAGCGGTGACGCGTGCCACTGTATCACTCTATGTAGGTTCGCCTTTGGGCTACAAGGGGCACATATTGTCCCAGAGTGAAATCATGTCGAAGAACATGCCTTCGATCCGAAAAGAGACAGAATTTGCTCTTTCCGCATTAATGGAAATCCCTTCGCAATATAAAGCAACGATCGAACTCAATTTACTAGGTAGTCGCAAAGGAATATCTCCCCGGAGGGTCGCACTCCCTCCTCCAATTCGCGCACCATCTTCAAAACCATCGTTTTCAAATAGTTTCCAAAAGGGCCCGCCATCGTATTATGGCCACAGCAGTCCTGTTCGTTCGGCTTCTTTATATGGTCAAACTAGCCCGGATCACTCATCGGCATCGATTTCAAAATCCACCTCCTATAACCAGGATGAGAAATGGACGAACATTACGATGAGATACACCGGATCAATTCCCTTCTAA	1768	41.4	MGGKSSREEGARYRHSSSFQSTSSFSGNQYGGGYPPQPSYSFPAQGDENYPAPEVYPQQQYGAPAAPAAAPSYGAQPHRPQKRLDKRYSRIADSYNSLEQVTEALAHAGLESSNLIVGIDFTKSNEWTDSLNPYEQAISIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEDRFCNGFEDVMSRYREIVPHLKLSGPTSFAPVIEQAMTIVEKSGGQYHVLLIIADGQVTRSVDTEHGQLSPQEQNTVDAIVEASKLPLSIVLVGVGDGPWDMMKEFDDNIPDRDFDNFQNHEAVTRATVSLYVGSPLGYKGHILSQSEIMSKNMPSIRKETEFALSALMEIPSQYKATIELNLLGSRKGISPRRVALPPPIRAPSSKPSFSNSFQKGPPSYYGHSSPVRSASLYGQTSPDHSSASISKSTSYNQDEKWTNITMRYTGSIPF	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati1g00082	446	PANTHER	COPINE FAMILY PROTEIN 1	3	385	IPR052079	GO:0004842(PANTHER)\|GO:0005634(PANTHER)\|GO:0016567(PANTHER)
	Cati1g00082	446	MobiDBLite	consensus disorder prediction	381	426	-	-
	Cati1g00082	446	MobiDBLite	consensus disorder prediction	1	83	-	-
	Cati1g00082	446	MobiDBLite	consensus disorder prediction	368	426	-	-
	Cati1g00082	446	MobiDBLite	consensus disorder prediction	15	35	-	-
	Cati1g00082	446	SMART	VWA-4	112	301	IPR002035	-
	Cati1g00082	446	Pfam	Copine	129	360	IPR010734	-
	Cati1g00082	446	SUPERFAMILY	vWA-like	113	284	IPR036465	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati1g00082	K16280	E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	33798	Cati11g00089	Cati1g00082
	34835	Cati1g00082	Cati8g01835

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr1:562228	Cati8g01833	Cati-Chr8:15091112	dispersed
	Cati	Cati-Chr1:562228	Cati11g00087	Cati-Chr11:510916	wgd