Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00023 | ATGCAAGAACAAAGTGGAAGTAGGAGTTGTCAACGAGGGCGGGAACAAGCTCAGGCAAAGGGAGCTGGAGGCGAGCATCGGCATTGGTGGCGTGCTCGTGGGCTAGCCGCAGGGCAAGGCAATGGAGCTGTTTGGGTATGCCAGTCGATGCAACGTGCCGGTACAGGAGTAATAATTAACATGGAATCCATACTGGCAAGGGCGCTGGAGTATACTCTCAAGTACTGGCTTAAATCTTTTACCAGAGATCAGTTCAAGCTACAAGGACGCACTGTTCAGCTCTCCAATTTAGATATAAACGGTGATGCCTTGCACGCAAGTCTTGGATTGCCCCCGGCATTGAATGTTACCACCGCCAAAGTCGGCAAGTTAGAGATTATTCTCCCTTATTTGAGCAATGTACAAGTTGACCCCATTGTTGTGCAAATCGATAAGCTTGATTTAGTATTAGAGGAAAATGACGATTTGGATGCATATAAGACCCCAGACAGTGCACACACGCCATCCACTCCTGCAAAAACCACTGGATATGGATTTGCCGACAAGATTGCAGACGGAATGACATTACAAGTACGGACTGTCAATCTTTTACTTGAGACTCATGGGGGTGCTAGACGACGCGGAGGAGCAACTTGGGCATCGCCAATGGCATCTATTACTATCCGCAACCTCTTGCTCTATACCACAAATGAGAATTGGCAGGTTGTAAACCTTAAGGAAGCCAGGGACTTTTCAAATGACAAGAAGTTCATCTATGTGTTCAAAAAGCTTGAATGGGAGCATCTATCCATCGACCTCCTGCCTCACCCTGATATGTTTTCAGCATTTTCTGAAGGTGCATTTAAGGATGACGATGGTGCAAAGCGTGTATTCTTTGGTGGGGAGCGGTTCCTTGAAGGAATATCTGGAGAAGCTTATATTACCATACAAAGGACAGAGCTTAATAGTCCACTAGGGTTGGAACTCCAGTTACATATAACCGAAGCCGTATGCCCAGCTCTGAGTGAACCAGGGCTTCGAGCTCTTCTTCGCTTCTTTACGGGATTGTATGTCTGTCTGAATAGAGGAGATGTAAATCCAAATGCTCAAGAGCGATCAGCGGAAGCTGCAGGGCGTACACTAGTCTCCATTATGGTGGACCATATATTTTTTTGCATCAAGGATACTGACTTCCAGTTAGAACTTCTGATGCAGTCACTTCTCTTTTCTCGGGCCAGCCTTTCTGATGGGGAAATTGCCAAATGCTTAACTCAAGTGATGATTGGTGGACTATTTCTGCGGGATACTTCCTCTCGCCCGCCATGTGCATTAGTGCAACCAAGTATGCAGGATGCTGCAGAGGAACAATTACACATTCCCGATTTCGCAACGAATTTTTGTCCTCCAATATATCCGTTAGGGGATCAGCAACGGAAATTAAGTGACCATGCTCCACTCATGTCCCTCCATTGTCTTCAGTTTATGCCCTCTCCTACTCCACCATCCTTTTGTTCACAAACCGTCATCAACTGCCAGCCTCTTATGATACATCTTCAAGAAGAGTCCTGTCTAAGAATATCATCCTTACTAGCTGATGGAATTGTGATTAATCCTGGTGATATTTCGCTAGATTTCTCTGTGAACTCCCTTGAAGTCAATGTGAAAGGACTAGATATCACTATTCCACTGGACAACCAAAAGCTTAAGTCTCCTTCCTGCAACAACTACCCTGTATATGAGAGCTCCTTTACTGGAGCAAGGCTTCATATTGATAACTTATTCTTTTACGAGTCACCTTCCCTGAGGCTGAAGATGCTCAATCTTGAGAAGGACCCAGCATGCTTCTGTCTATGGAAGGGGCAACCCATTGATGCCAGCCAGAAAAAATGGACAACTGGAGCTTCTCTCCTTAGTCTGTCTCTGGAAACATGTAATAAATCGAAAGGAGCTGGTGGTTCTCTTTTGCACTCAGAATTGTGGAGTTGTGTTGAGATTAAAGGTGCTTGCATCCAGGTAGCAATGGTAACAGCAGATGGAAGCCCTTTAATAGATGTCCCTCCCCCAGGGGGTGTTGTTAGAGTAGGAGTTGCTTGTGAACAATATTTGTCCAACACCTCGGTTGAGCAACTATTCTTTGTGTTGGATCTCTATGCCTACTTTGGTATGGTCAGCGAGAAGATGGCCATGGTTGGAAGAAGTAAACATAAGAAAGCGGTGAAGCATGAACCTTGTGATGGAAGTCTGATCGAAAAAGTTCCTGGTGATACTGCTGTTATCTTAGCAGTTAAGGACCTAAAGCTAACATTTCTAGAATCTTCCTCCGTGGACATTCAGGGAATGCCTCTAGTTCAGTTTGCTGGGCAAGATCTGTTCATGGAAGTTACTCATAGAACCTTGGGTGGTGCCATGGCCATTTCATCAACTTTACGGTGGGACAAAGTTCAGGTGGAGTGTGCAGAGACTGAGAGAAGCTCTATAAATGCAAATGGTGTAATGCCAAATGCTACCTCAGATTTTCTTCCTGTTCCAAATGGCAACCCTAAATTGAGAACTGTCTTTTGGGTGCAAAACAAAAGGATTCATCAAGCAAATGACAGTGCTGCCTCAATTCCATTTTTGAATTTACGCATGGTGCATGTTATTCCGTATAATTCACAGGATACAGAGTGTCATAGCTTAAGTGTGACAGCTTGTATTGCGGGTGTACGCCTTGCAGGAGGAATGAATTATGTTGAAGCTCTACTCCACCGCTTTGGAATTCTAGGACGAGATGGTGGTCCTGGGGTTGGGCTCTCCAAGGGTTTGGAGCATTTATCTGCTGGGCCATTGTCAAAACTTTTCAAAGCATCACCTCTACTTGTTCAGGATTTCAGAGAGAATTCTAAAAGTGAAAGCATGGAGGAGAAGCATAGTGGTTACTTGCACTTGGGTGCACCGGATGATGTAGATATATCACTAGAATTGAAGGACTGGTTATTTGCATTGGAGGGTGCAGAGATGGCAGAAAGATGGTGGTTCTACAGTTCAGATGATTCTTACAGAGAAGAGAGGTGTTGGCACACAACTTTTGAGAGTTTTAAAGTTAAAGCAAACAGCAGCAAAAATAACTCCGCGAATGGCAAAAAGAGTTTTCCTGGAGCACAGAAGTATCCTTTTGAATCAGTGACGGTCGGTGTTGAAGGCTTGAAGACGTTAAAACCCCAGCAGCAGAAGGGAATTGTAGCCACAAACGGGCACAAGCAAACTGTCGAGTCACATGGTGGGGTAGATCTTGAAGCTGACATAGTGTTATCTGAAGATGATGGTGCCAATAATTGGGTGGTGGAAAGTTTAAAATTTTCTGTGAAACATCCGGTTGAGGCAATTGTAAGCAAGGATGAGCTGCAACATGTTGCTCAACTATGCAAGTCAGAAGTTGATTCCATGGGGAGAATAACTGCTGGGGTTTTGCGTGTGTTGAAGCTAGAAGGATCAGTTGGTCAGACAGCAATGGATCAACTAAGCAACCTTGGAAGTGAAGGCTTCGACAAGATCTTTTCACCAAATAACCTGCGAAGAGATATTAATGCTTCTAGTCCGTCTTCCCTAGGGACTTCAGATAGCCAACGTTCTTCTTTGTCCTTTAATTCAACATTAACTAAACTGGAGGCTGCGTTGTTAGATTCACAGACAAATTGTGCAGCTCTTGCTGATGAATTAAGCAGTTCTGAATCTTCCAAGCCACATCTTCAAAGTGTGGAACAACTGGCTCAGAAACTAGCGAGTATGCAGAAACTGTTGTCAACGTTGCAGACTCAAAAAGCACAAGAGACGGTCTTAGTGCTTGTGTTCTAA | 3813 | 44.51 | MQEQSGSRSCQRGREQAQAKGAGGEHRHWWRARGLAAGQGNGAVWVCQSMQRAGTGVIINMESILARALEYTLKYWLKSFTRDQFKLQGRTVQLSNLDINGDALHASLGLPPALNVTTAKVGKLEIILPYLSNVQVDPIVVQIDKLDLVLEENDDLDAYKTPDSAHTPSTPAKTTGYGFADKIADGMTLQVRTVNLLLETHGGARRRGGATWASPMASITIRNLLLYTTNENWQVVNLKEARDFSNDKKFIYVFKKLEWEHLSIDLLPHPDMFSAFSEGAFKDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLELQLHITEAVCPALSEPGLRALLRFFTGLYVCLNRGDVNPNAQERSAEAAGRTLVSIMVDHIFFCIKDTDFQLELLMQSLLFSRASLSDGEIAKCLTQVMIGGLFLRDTSSRPPCALVQPSMQDAAEEQLHIPDFATNFCPPIYPLGDQQRKLSDHAPLMSLHCLQFMPSPTPPSFCSQTVINCQPLMIHLQEESCLRISSLLADGIVINPGDISLDFSVNSLEVNVKGLDITIPLDNQKLKSPSCNNYPVYESSFTGARLHIDNLFFYESPSLRLKMLNLEKDPACFCLWKGQPIDASQKKWTTGASLLSLSLETCNKSKGAGGSLLHSELWSCVEIKGACIQVAMVTADGSPLIDVPPPGGVVRVGVACEQYLSNTSVEQLFFVLDLYAYFGMVSEKMAMVGRSKHKKAVKHEPCDGSLIEKVPGDTAVILAVKDLKLTFLESSSVDIQGMPLVQFAGQDLFMEVTHRTLGGAMAISSTLRWDKVQVECAETERSSINANGVMPNATSDFLPVPNGNPKLRTVFWVQNKRIHQANDSAASIPFLNLRMVHVIPYNSQDTECHSLSVTACIAGVRLAGGMNYVEALLHRFGILGRDGGPGVGLSKGLEHLSAGPLSKLFKASPLLVQDFRENSKSESMEEKHSGYLHLGAPDDVDISLELKDWLFALEGAEMAERWWFYSSDDSYREERCWHTTFESFKVKANSSKNNSANGKKSFPGAQKYPFESVTVGVEGLKTLKPQQQKGIVATNGHKQTVESHGGVDLEADIVLSEDDGANNWVVESLKFSVKHPVEAIVSKDELQHVAQLCKSEVDSMGRITAGVLRVLKLEGSVGQTAMDQLSNLGSEGFDKIFSPNNLRRDINASSPSSLGTSDSQRSSLSFNSTLTKLEAALLDSQTNCAALADELSSSESSKPHLQSVEQLAQKLASMQKLLSTLQTQKAQETVLVLVF | 1270 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00023 | 1270 | Coils | Coil | 1239 | 1259 | - | - | |
| Cati3g00023 | 1270 | PANTHER | UNCHARACTERIZED | 61 | 1257 | IPR026728 | - | |
| Cati3g00023 | 1270 | Pfam | VPS13-like, N-terminal | 61 | 159 | IPR026854 | - | |
| Cati3g00023 | 1270 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00023 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 35452 | Cati3g00023 | Cati9g01986 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 895779 | Cati | Cati3g00023 | Cati-Chr3:169597 | Cati9g01986 | Cati-Chr9:21193939 | |
| 914989 | Cati | Cati3g00023 | Cati-Chr3:169597 | Cati3g00025 | Cati-Chr3:172134 | |
| 920849 | Cati | Cati3g00022 | Cati-Chr3:169597 | Cati3g00023 | Cati-Chr3:169597 | |
| 920850 | Cati | Cati3g00023 | Cati-Chr3:169597 | Cati3g00024 | Cati-Chr3:169597 |