Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00035	ACTGTAGCGTGTAGTCGCCTCCACCGGATGAAATCCCCCCCTCCCTCTGGATTTCAGATCCAGTTCACAAACATGGTTTCCACAGCCAAGATCAAATCTGTTGATTTTTACAGGAAAATTCCAAGAGATTTGACAGAGGCGTCACTATCAGGTGCCGGCTTGTCTGTCATAGCAGCTGTTGCCATGATGTTTCTATTTGGAATGGAGCTACGTAACTATTTGGCCATCAGTACCTCGACTTCTGTCATAGTTGATAGAAGTTCTGATGGGGATTACTTACGGATTGATTTTAATATTAGTTTACCGGCCTTATCCTGTGAGTTTGCATCTGTGGATGTGAGTGATGTACTGGGAACTAACAGGTTGAACATAACAAAAACAGTTCGCAAATATTCAATTGATAAACATCTACGAACTACTGGCTCTGAGTATGATTCTGGACCAGTTACTAATTTACTCAAGCACGATGATGAAGTTGATGAGGAATATGGTGAAGGATCTGTTACTCTAAATGCACGTAATTTTGATAGAATATCTCATCAGCATTCAATTTTGGTTGTGAATTTCTATGCTCCTTGGTGCTATTGGAGTAACCGTCTGAAACCCTCATGGGAGAAGGCAGCCAAAATTATGAGAGAAAGACATGATCCAGAAGTGGATGGTCGTATCATTATGGGCAAGGTGGACTGTACTGAAGAAGTTGATCTGTGTAGGAGGGACGAGCATGGGCACCACGAGCATGAATCATATTATGGTGACAGAGATACAGAGACCTTGGTGAATACAATGGAAAACTTGGTTGCACCTATTTCATTGGAGTCACCAATCCTGGCCTTGGAGGACAAATCTGCAAAAAGACCTGCGCCACGTGAAGCAGGATGTAGAATTGAAGGGTTTGTACGAGTCAAGAAGGTTCCTGGTAATCTCGTAATCTCAGCCCGTTCGGGGGCCCACTCCTTTGACGCTTCCCAGATGAACATGTCACATGTAATTTCTAGTTTTTCCTTTGGTAAGAAGATCAGTTCAAGGGTGATGAGTGATATGAAGCGAATGGTACCTTACATTGGTGTAAGCCATGACAAGTTGAATGGCCAGTCATATCTCACTGACCCAGAAGATCGTGCCAACGTTACAATAGAGCATTATCTTCAAGTTGTGAAGACGGAAGTTATGAGGTCATCTCATCAACTTATTGAGGATTACGAGTACACAGCGCATAGCAGCTTGATGCATGCTCTTTCCATCCCTGTTGTAAAGTTCCATATTGAGCCATCTCCAATGCAGGTCTTGATAACGGAAAATTCCAAATCGTTTTCTCATTTCATCACCAATGTCTGTGCCATTATTGGTGGTGTTTTCACGGTTGCTGGGATACTGGATTCAATTCTGCATAACACGTTGAGATTGGAGGAGGAGGAGAGTCTTGGTCTTGGCCTGTGGGAGCTGGAGACGGAG	1455	43.44	MKSPPPSGFQIQFTNMVSTAKIKSVDFYRKIPRDLTEASLSGAGLSVIAAVAMMFLFGMELRNYLAISTSTSVIVDRSSDGDYLRIDFNISLPALSCEFASVDVSDVLGTNRLNITKTVRKYSIDKHLRTTGSEYDSGPVTNLLKHDDEVDEEYGEGSVTLNARNFDRISHQHSILVVNFYAPWCYWSNRLKPSWEKAAKIMRERHDPEVDGRIIMGKVDCTEEVDLCRRDEHGHHEHESYYGDRDTETLVNTMENLVAPISLESPILALEDKSAKRPAPREAGCRIEGFVRVKKVPGNLVISARSGAHSFDASQMNMSHVISSFSFGKKISSRVMSDMKRMVPYIGVSHDKLNGQSYLTDPEDRANVTIEHYLQVVKTEVMRSSHQLIEDYEYTAHSSLMHALSIPVVKFHIEPSPMQVLITENSKSFSHFITNVCAIIGGVFTVAGILDSILHNTLRLEEEESLGLGLWELETE	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00035	476	Pfam	Thioredoxin	159	230	IPR013766	-
	Cati3g00035	476	CDD	PDI-a-family	159	254	-	-
	Cati3g00035	476	PANTHER	ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN	16	459	IPR045888	GO:0005783(PANTHER)\|GO:0030134(PANTHER)
	Cati3g00035	476	SUPERFAMILY	Thioredoxin-like	154	257	IPR036249	-
	Cati3g00035	476	Gene3D	Glutaredoxin	149	279	-	-
	Cati3g00035	476	Pfam	Endoplasmic reticulum vesicle transporter	278	451	IPR012936	-
	Cati3g00035	476	Pfam	Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)	22	112	IPR039542	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00035	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	35456	Cati3g00035	Cati7g03381
	35457	Cati3g00035	Cati9g01994

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	895789	Cati	Cati3g00035	Cati-Chr3:222480	Cati3g00037	Cati-Chr3:222480
	920853	Cati	Cati3g00034	Cati-Chr3:222480	Cati3g00035	Cati-Chr3:222480
	920854	Cati	Cati3g00035	Cati-Chr3:222480	Cati3g00036	Cati-Chr3:222480