AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00047 ATATATAGAGATAAAAATATTAAAAGAATATAAATTTCCATTGAAAAAAAGTGAGATATTATGCAAAATCAATCTTTCCTTTTATCTACGGTTATGGGTTATGCACCAATAATAATACAATACCTCAAGATTCAAAATTTGCAATCTCAACTCAACCCACAACAGTTAAAGTTTGGCGGAAAATCTGAAAGATTGTCACACTCTCAAAGAGTTGGCCAATCTTTGTGTGTCGGCTGGTGGATAGCTGAACAAGAACTACCTTCTTCAGCCATCGGAGAAAATGGCTTACCGCCACTTTACTACAGCCACCGGAAAACCACCAATTTTGCTACTTCCATCGCATTCTCCCAGTTACCATTAGCTAGACATGTTGTATCTGGGCTTGCTGCTTCCTTGATTGCAAACGGTATGCCAACGCTTCCTGTTGATGAGGGTTCAAATCTGATGATGATGAGAGGTATGACAGCAAGGAACTTTGATCCTGTAAGATACGCCGGAAGATGGTTTGAAGTTGCTTCACTTAAGCGTGGATTTGCTGGACAAGGGCCTGATGGCTATATCACTGGTATACGGGGCAGGGTTCAGTGTCTTTCAGACGAAGATACAGAGAAAACCGAAACAGACCTAGAAAGGCGAGAGATGATTAAAGAAAAGTGCTACCTTCGCTTTCCCACATTGCCTTTCATTCCTAAAGAACCCTATGATGTGATCGACACCGATTATGACCATTTTGCCCTTGTTTCTGGAGCAAAAGACAAGAGCTTTATTCAGATATACTCAAGGACACCGAATCCAGGGCCAGAATTCATAGCAAAATACAAGCTTGTGTTGGCAGAGTATGGCTATGATTCAAGCAAAATCAAAGACACTCCACAGGACTGTGAGGTGTCTGATAGCCGGTTAGCTGCGATGATGTCGATGAATGGAATGCAACAAGCTTTAACAAACCAGTTTCCTGATCTTGGACTCAAGTCTGCTGTTGAGTTCAACCCCTTCACAAGTGTATTTGACACCTTGAAGAAGCTTGTGCAGCTATATTTCAAAGGTTACGCTATCCGAATGATTCAGAATAGGATTTCTGCTACCTTTTCTAGTATGGTGGTGTTTGGTTTTGTGGGTGCACCATCTAAGGCTGCTTTTGGAGATGGGAGTGTCTTTGGAGATGCAACTTTGATGGATTGTAGTTCTCTTGTCATTAAAGCATTGATGGTGCCGGTGGTTCCAACTTTGATGGATCCTCCACCACCCTTGATGGCTTCCAGA 1263 42.04 MQNQSFLLSTVMGYAPIIIQYLKIQNLQSQLNPQQLKFGGKSERLSHSQRVGQSLCVGWWIAEQELPSSAIGENGLPPLYYSHRKTTNFATSIAFSQLPLARHVVSGLAASLIANGMPTLPVDEGSNLMMMRGMTARNFDPVRYAGRWFEVASLKRGFAGQGPDGYITGIRGRVQCLSDEDTEKTETDLERREMIKEKCYLRFPTLPFIPKEPYDVIDTDYDHFALVSGAKDKSFIQIYSRTPNPGPEFIAKYKLVLAEYGYDSSKIKDTPQDCEVSDSRLAAMMSMNGMQQALTNQFPDLGLKSAVEFNPFTSVFDTLKKLVQLYFKGYAIRMIQNRISATFSSMVVFGFVGAPSKAAFGDGSVFGDATLMDCSSLVIKALMVPVVPTLMDPPPPLMASR 401
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00047 401 PANTHER LIPOCALIN 136 272 IPR002345 GO:0036094(InterPro)
Cati3g00047 401 Pfam Lipocalin-like domain 142 272 IPR000566 -
Cati3g00047 401 SUPERFAMILY Lipocalins 135 276 IPR012674 -
Cati3g00047 401 PRINTS Lipocalin signature 216 228 - -
Cati3g00047 401 PRINTS Lipocalin signature 142 154 - -
Cati3g00047 401 PRINTS Lipocalin signature 238 253 - -
Cati3g00047 401 Gene3D - 134 284 IPR012674 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00047 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
920860 Cati Cati3g00046 Cati-Chr3:247625 Cati3g00047 Cati-Chr3:247625