Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00057	ATGCTTATAGATATATGCAGGCAGGGCTTTGAAGCTTTGAGAAAGATTTCAAGTTCCGTCAATCAGCAATTGCAGCAGAACGATATTCGCAAGAACCCTGCTTTCAGATCACAGTTTCACGAGATGTGTGCCAAAGTAGGAGTAGACCCACTCGCATCAAATAAAGGTTTCTGGGCTGAGCTCTTAGGGATCGGGGTGCAAATCGTTGATGTCTGCTTGGCTACTAGACCCCATAATGGGGGTTTGATCAACTTGGAGGAACTATGCAAGCTTCTAAGTCAAAGACGAAAGGGTGCTCGTGAGGTTGTGTCTGAAGATGATTGCTTGCGTGCAATTGGTAAACTCAAGGTGTTAGGGAGTGGTTTTGAAGTGATTACTGTTGGGAAGAGAAAGCTTGTCCGCTCTGTCCCAACTGAATTGAAGAAAGATCATAATGAAATTCTAGAGTTGTCTCAAGCTCAAGGTTTTGTGACAGTTGAGGAAGTAGAGAGACGGTTGTCATGGTCCAGTGGTCGTGCCACCGATGCCCTTGAAACTTTATTAGACGAGGGGCTTGCGATGATTGATGAAGGCCACAGAGATGGCAAACGACGTTACTGGTTCCCTTGTGTCTCTTCTGTCTCTTCCTTTGTGGCATCTGAGACTCTTTGATTTTCTTTCTTAGTGAGAGTTTTCCCACCTCAATGTTAATGTGTTTAAAAGAAAAGAAACGAAAAGAAATGCCCAATTATGTAATTTTATGTTTGTTTAATGATTCAGATATTATTCAACAAACAAAGAGCTAAACTTTATATTGTTGGTATTTGCATTTGAAAAAAGTGAGAGTTGTTGGTTAAAT	838	41.41	MLIDICRQGFEALRKISSSVNQQLQQNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGVQIVDVCLATRPHNGGLINLEELCKLLSQRRKGAREVVSEDDCLRAIGKLKVLGSGFEVITVGKRKLVRSVPTELKKDHNEILELSQAQGFVTVEEVERRLSWSSGRATDALETLLDEGLAMIDEGHRDGKRRYWFPCVSSVSSFVASETL	216

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00057	216	Gene3D	-	13	56	-	-
	Cati3g00057	216	Pfam	EAP30-Vps36 family	26	190	IPR040608	-
	Cati3g00057	216	Gene3D	-	57	136	IPR036388	-
	Cati3g00057	216	FunFam	Vacuolar-sorting protein SNF8	57	136	-	-
	Cati3g00057	216	Gene3D	-	137	215	IPR036388	-
	Cati3g00057	216	SUPERFAMILY	Winged helix DNA-binding domain	140	204	IPR036390	-
	Cati3g00057	216	SUPERFAMILY	Winged helix DNA-binding domain	25	139	IPR036390	-
	Cati3g00057	216	FunFam	Vacuolar protein sorting-associated protein	137	215	-	-
	Cati3g00057	216	PANTHER	EAP30 SUBUNIT OF ELL COMPLEX	26	209	IPR016689	GO:0000814(InterPro)\|GO:0000814(PANTHER)\|GO:0043328(PANTHER)\|GO:0071985(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00057	K12188	ESCRT-II complex subunit VPS22

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	895800	Cati	Cati3g00055	Cati-Chr3:269677	Cati3g00057	Cati-Chr3:269677
	920864	Cati	Cati3g00056	Cati-Chr3:269677	Cati3g00057	Cati-Chr3:269677