AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00058 AAAATGAAGATATTGTGGTGGACTGGTGGCCGGTAGGTTTTGGTCGTGAAAGGAGAGAGGGGAAGAGGGAATTTAAAAAAAGGAAAAAGGAATAATAAAACTCAAGTAATTAAAAAAATACCCTCTTTTGGTAAATATATTTGAAACAACACCTATTTAGTAAATATGTTTTAAAAATACACTTGTTTGGTAAATAACTCTATCAATTTTATAGAAAGTGCTGACAATGCTAACAATATAAAACTCCTTTCCGAGAAAGATAGCTTCAACCGATTTTTACATCTGCAATGTCTTCTTCATCCATCTTCCTCTGCAAAACCCACTTTCTGTTAACCCTAATCGCCATCTTAATCGTCTCTTCTACCCGTGTTTCACGGGTAGAAGCCATTAAAGCACCAATTCATCCCGAAGACATACTCCCCCTTTTGCCCCACCAAGTTTCATGGCCGATTCTCAACTCCCTTCGAAGCGCAGCCGATCTTCTGCCGAGTTTCGTGGGCGCAGCCTCGATTGCAAATAATTCCGATTTCCATTGGAAAGGGTCTTGCTTTTATGAGAACACTGCCTGGTTAGAACTCCACAATAAAAGCGGTACTCAATTTGGTGGAGGCACTCTTCATATCAAGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTATGTCTTCGCTACACCATATCGTGTGACGTGGGACTATTACTTTTTATCCCGTGAGCATACTCTTGAGTTCGACGAGTGGTCCGGGAAAGCCGAGTATGACTACGTAAAACATAAGGGCGTTTCCATTTTTCTCATGGAAGCAGGGATGTTAGGCACCTTAAAAGCATTATGGGAGGTCTTCCCTTTGTTCACAAATACTGGATGGGGTGAAAGTTCTAATCTTGCTTTTCTCAAGAAACATATGGGAGCTACCTTTGAAGCGCGACCCGAGCCATGGGTTACAAACATCACCGTAGATGACATACACTCAGGAGACTTCCTTGCGATATCCAAAATTCGCGGTCGATGGGGCGGGTTTGAGACTCTTGAGAAATGGGTGTCTGGGGCATATGCAGGTCATTCAGCCGTTTGCTTGAGGGATGCCGAAGGAAAACTATGGGTTGGGGAATCCGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTGCCGTGGGATGAGTGGTGGAACTTCGAGCTAACCGAAGATGATGCTAATCCGCATATTGCATTGCTTCCTTTGCATCCTGACCTTCGATCTAAGTTTAACGAAACTGCTGCATGGGAGTATGCACAAAGCATGATAGGGTTGCCATATGGTTATCATAATTTGATATTTAGCTGGATAGACACTATAAGTGATAACTATCCACCACCTTTGGATGCTCATCTGGTTGCTTCTGTTATGACTGTGTGGAATCAGCTGCAGCCTGCATATGCTGCTAACATGTGGAATGAAGCCTTGAATAAGCGGCTTGGTACTCAGGGGCTTGATCTTCCTGAAATTTTGGTCGAAGTTGAAAAGCGTGGTTCGTCTTTTGCTGAACTACTAACTATACCTGAACAAGACGACTGGGTATACGCTGATGGAAAATCGACTTCTTGTGTTGCATTTGTCCTCGAAATGTACAAGGAAGCAGGTCTCTTCGGAGATCTTGCAAGCCAAATTCAAGTTACTGAGTTCACGATAAAGGATGCTTACATGCTCAACTTTTTTGAAAACGATTCGAGTAGGCTGCCAAAATGGTGTAATGAAGGGGACACAGTCGAGCTTCCATTCTGTCAAATCAAAGGGAAGTACCGAATGGAATTACCTGAATACAATACTATGGATCCATACCCTCATATGACCGAAAGTTGCCCATCACTTCCCCCATACTATTCAAGGCCAGACTACTGTTGAAGCTACATGCATTCCATCCCTTGGACCTTACTTATCTATGTATGGGATTTACTGGGTTGGTTTGGTTTGGTTTTAGTAGTACTGAAGCTACTGATTTGTTGTATAGACGGTAGGTAAACTTGTAGGATCATAGACATAGTTCGTTTCTCCTTTATCTAATGACGAAGGATGAATCTTACACGGACCGTTGTATATATTTGATGTCATAGATTGTGTATTGTAATTCTGGTGCTTAACAAGATGGATGTGCTTGTATAACTTCTTATTAGTCCTACATGCTAAAACCACTCTACCCTTTGGGATGGAGGACAGTATTGCGTACAAAGAAATTCTCAAAATGATTTT 2234 41.99 MSSSSIFLCKTHFLLTLIAILIVSSTRVSRVEAIKAPIHPEDILPLLPHQVSWPILNSLRSAADLLPSFVGAASIANNSDFHWKGSCFYENTAWLELHNKSGTQFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWSGKAEYDYVKHKGVSIFLMEAGMLGTLKALWEVFPLFTNTGWGESSNLAFLKKHMGATFEARPEPWVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDAEGKLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDANPHIALLPLHPDLRSKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNYPPPLDAHLVASVMTVWNQLQPAYAANMWNEALNKRLGTQGLDLPEILVEVEKRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLASQIQVTEFTIKDAYMLNFFENDSSRLPKWCNEGDTVELPFCQIKGKYRMELPEYNTMDPYPHMTESCPSLPPYYSRPDYC 533
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00058 533 PANTHER OS01G0793500 PROTEIN 12 533 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00058 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35460 Cati3g00058 Cati9g02006
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:289066 Cati4g03225 Cati-Chr4:90670714 dispersed
Cati Cati-Chr3:269677 Cati3g00058 Cati-Chr3:289066 proximal
Cati Cati-Chr3:289066 Cati9g02006 Cati-Chr9:21551462 wgd