AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00073 AATTTGGGAGCCGCCCCCTCGATGATATATTATTATAAACTCCTTTTTCTAAAAAATCAAAAAACTCATTCCCATTTAACCTGCCTTCATTCCAAGGTGTCATCTTTCAAGAACTACATCTACCGCTAGATCCCTTTCTCTCTCTCTGATTCGTCAACTCAGAAACGAATTCACTTCATACTATCAAGAACAACGTCCAAATGGGTTGCAGAAATGGAGGTGAATTCCAACCCCAAGAAGATGAGAGAAGATCATCATCATCATCATCTTCTTCAATTGTTAACGATGCGTTGCTGTTAACAACCATGTGCATCATTGGCTTCCCTGTTGATGTTCACATCAAGGATGGTTCTGTTTATTCTGGAATCTTCCACACCGCCTCTGTTGACGACCATTATGCTATTGTGTTGAAACGAGCAAGGATGATCAAGAAAGGAAGTTGTGATTCGAATGTGGCAAATGAGGGGGTGATAGGAACACTTGTAATCCAGTCGGAGGATCTTGTCCAAGTGGTTGCAAAGAGAGTACTACTTCCAGCGGATGGTTTTGCCGGACATGAAACCGGGGAAGATACAGAGGTTGTGGCGTGCGCCTTTCCTTCTAACGGAACTCCGTTGACCGAAGCTAATAAAACAATCTCTAACAAGTCAAATGTTGACCAGCCACATGCTAATCAAACAAGATGTGCTTCGGGAGCTGAAAATGGGCTTGCTAATGGGTTTAGGCCTGAGCCTGCTATTCCGTCGAGCAATAGAAAAGCCGGTTCAACGAAGAAAGAAGAATCTTTGAACGATCAAGATGAAGTTCAAGCAAAACCGTCTAAAGTCCCGGTTAACGGATCACTCCCTGATGCTTCTTCTACTTCCAAGAAACAAGAAACCGTTGACGGTGTTCCTTCCGCTACCATATCTTCAGAACCATCATCAACTCCAAGTGAAGCTGTCACTTCGAAAATCTCGAATCCTAATCGACCCGTTAAGGAATTTAAACTTAACCCAGGTGCAAAGATTTTCTCGCCGTCGTTTCCAAATAAGAGATCGGCTACGCCTCCAGCAATGCCGGCGGGTGCAAATCTTGCGTACGTTCCTGATGCTTATCCTGCTGTACCTGTAGCCACTCCACAGCCGGAAGTTGAAATCAACCCGTATCCTCATCATCGTTCAGTGCCCGTTAAGTTTGTTCCGTATGGTAACTTGCTGTCTGGAAATGGAGGCACCGATGTTCAACATCCTCCACCTATTGTCGGATATGTTGCAAATAGGAGTCAGCCGGTTAGATATGGCGGGCAATATCATCCTGTTCAAACAGCGCCTACCTACGTCCAACCAAGCTCTCAGAATGTAATGGTTGGAAGATTGGGACCGGTATTCTACGTCCATCCGCTTCCTCAAGATATGGTCCCGAGTACAACGGGTTTCTCTCAAGGGTCTACGTGCTCTATCTTGACTCCGCACCAAGTCCATGTCCCTAAGCACCAAGGAACTGGAGCGGCGCAAGCGTTGCAGCTATGTGCGACACCGCCATTTATAGCCGCGGGTGGTCAGGCACCGTTTGTGTTGCCGAGCCACATCCCGATCTCGCAACCGCCGTACCCGGTGATCCGGCCGATCTCGGTCCCGGGATCCAATGGTTTTTTGGTGTCAAAGTTTTCTTGAATTCAGAAAATAGAGGCTGCTTCCCTTATTGTTGGTTGGTTTAGAGAGATGAAAAGGTCTTGACCAAGTTTTGACTTTTTGTTATATTCTTTTTGGTTTTTTGTTTTTTGTTTTTCTTATTCTTCCCAGTTTGATAATTTTTTTCCTGGTGGGACGAAGGGGTTCGCCACCTTCATTCTGTTTTGGTATTTTTGTAATTCAAATACAGAATGGGTTCAACTTTGAAGAGAGAGCTAAAGAATATCATCATTGATTTTGGATATAAAGTTTGAGTTGCTTTTTGGTTTCACCATTCTCTATCTATCGACTGATGATTGGATTTCCAATTGTAAT 1988 44.47 MGCRNGGEFQPQEDERRSSSSSSSSIVNDALLLTTMCIIGFPVDVHIKDGSVYSGIFHTASVDDHYAIVLKRARMIKKGSCDSNVANEGVIGTLVIQSEDLVQVVAKRVLLPADGFAGHETGEDTEVVACAFPSNGTPLTEANKTISNKSNVDQPHANQTRCASGAENGLANGFRPEPAIPSSNRKAGSTKKEESLNDQDEVQAKPSKVPVNGSLPDASSTSKKQETVDGVPSATISSEPSSTPSEAVTSKISNPNRPVKEFKLNPGAKIFSPSFPNKRSATPPAMPAGANLAYVPDAYPAVPVATPQPEVEINPYPHHRSVPVKFVPYGNLLSGNGGTDVQHPPPIVGYVANRSQPVRYGGQYHPVQTAPTYVQPSSQNVMVGRLGPVFYVHPLPQDMVPSTTGFSQGSTCSILTPHQVHVPKHQGTGAAQALQLCATPPFIAAGGQAPFVLPSHIPISQPPYPVIRPISVPGSNGFLVSKFS 484
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00073 484 MobiDBLite consensus disorder prediction 213 256 - -
Cati3g00073 484 MobiDBLite consensus disorder prediction 141 166 - -
Cati3g00073 484 MobiDBLite consensus disorder prediction 187 201 - -
Cati3g00073 484 MobiDBLite consensus disorder prediction 1 22 - -
Cati3g00073 484 PANTHER ATAXIN 2-RELATED 158 447 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Cati3g00073 484 Pfam Ataxin 2 SM domain 28 107 IPR025852 -
Cati3g00073 484 MobiDBLite consensus disorder prediction 141 261 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00073 - -