AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00076 TAAGTTGTCAAACACTTGCTTCCTGTCAACAGTCAACACCATAAATAAAATCACAGGAGAGAAGGGAGGAGAGGAGAGTGAAAAGACATTGGGGAACAATAGAGGTGAAAAGATGGAGAGCTACCCGAGGCCAAGCAAAGAGGCTGACCCTCAAGATGCGGACATGCAACTGCATGTGTGTGCTAGTGTTACTCTGATCTGCTTTTCCAACTCCCAAATTGCCGTAACCGATAAAAGCTTTAGATTCTTTTAACCAAAGTCTGCATATATTGTGCTAACTGCCGAAAATGAACCCGGAGAACCAAGAAATAAGACCTGATGCATCACTAATTCTTCCTGAAAAGCGAAAACGTGGGCGTCCCCGAAAGGATCCAAGTGAAAGACGAGCGGCAAAAGCTCGTTCCCAAGCTGCTCGGATGCCTCCTGGTCATGGCCAGCTGAACAGCAACCCTCCTCGAGTTGATCCAATCAACGATCCAACTGAAGTTATGATCGGACAGCCTGTTACTGGTGTTGTTGAGGCCACTTTTGAGGCTGGCTACCTGCTTGCTGTCAGGATTGGGAACTCAAACATCACATTGAGGGGGGCTGTCTTCAAACCAGGGCATACCGCCCCCGTGACAGCCGAAAATGATGTGGCACCTCATGTTGAAATGATCAAAAGAAGTGAAGTTCCATTTCCAGAATTCCATACCCCTATTCGTAGGCGCAAACGACGATCAAAGGAGAAGAATATGCAGCTTGTTACTTATGTTGGAAATGGATCCCCTCTGGGAGACCAGGCGAATGCAAATTCACCGTCTAAAGGGAACTATGTTATCGCCCCTTCTGTCCCTCCAGTTGGTGCTAGAGGAACTGTGGTCCCTGTCGTTCTTCAACCAATTAACCTATCAAATGGATTATCAACCAATCAACCTGCTCCTCATTTGAGGGCCTCACAAGGCAAGCCAGTGCACACGGTTCTGCCTTTAGCGGTTTACCCACCGAATGGATCAACGAGCCAAGCATCAGAGTCTCAAACTAGCTCCCAGTTTACACCCACGGGTTCTGGAAATGAAAATGCTTCTTTCAAACAAGGCATGCCAGATGCTCAACAGGTGGAAGGGGCTAAGCCAATAAAACCAAATGATGTGCAACTGCAAGGTGGTGGTATGTTTGCCAACCAAGTCAAAACAGAATCAGATATTGCTGACATGAATGAGCCTCTTTTTGTTGAACCCCTGCAAACCCGACATGTAGTTCACCATTTCCAGCCTGCACCAGTATTAGGAACTGTCATGCATAGTGGAACCGGAAGAATGACAGAGCTTTTGCAGGCTGTTCAGCAGAATATGGGCGATGACCAGGTTCCTCGAAACGGACATCCAGCTGCAGTTTTTAACGTTGGTCGAAACAGAGATGAAGGAACTGATCATCAGGCATATTCTCAGGCAGGAAGGATGTAAAAGTTAAGTCAGCCTCAAGTCTCATAACCTTCCAAATGCTATGGGGTCGAAAACCGTTGGATCTTGTTTTTATCTTACAGCGCGTAACAGAACAGCTAGTGTTAGAGGATAGACTGCCTGCAGTTTCTTTATCGTTTCATAGAAAAAGCTACCTTGTTTATGTTTTCAAAAAGAAAAAAAAAAAGAATTGGCTTGCTAACTTCGTTGAACTCCGGTAAAAAGTCGAAATCCCGTAAGTAGTCATGTATGCGATGGTGATTCCATCCGGTTTCGTTTCGTGTTCTATGATTAACAAGTTCTTTTTTCTCCAAGTAGTAGTTACATGTATGCAATGGAAGATGGTTTCATCTGGTTCCGTTTCGTTTTCCATGATGTATATAAATATTTATATACGACAAATTAAATTAACTATGATTGGATGGATAATAATTTGACTGGAT 1885 44.46 MNPENQEIRPDASLILPEKRKRGRPRKDPSERRAAKARSQAARMPPGHGQLNSNPPRVDPINDPTEVMIGQPVTGVVEATFEAGYLLAVRIGNSNITLRGAVFKPGHTAPVTAENDVAPHVEMIKRSEVPFPEFHTPIRRRKRRSKEKNMQLVTYVGNGSPLGDQANANSPSKGNYVIAPSVPPVGARGTVVPVVLQPINLSNGLSTNQPAPHLRASQGKPVHTVLPLAVYPPNGSTSQASESQTSSQFTPTGSGNENASFKQGMPDAQQVEGAKPIKPNDVQLQGGGMFANQVKTESDIADMNEPLFVEPLQTRHVVHHFQPAPVLGTVMHSGTGRMTELLQAVQQNMGDDQVPRNGHPAAVFNVGRNRDEGTDHQAYSQAGRM 385
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00076 385 MobiDBLite consensus disorder prediction 1 57 - -
Cati3g00076 385 MobiDBLite consensus disorder prediction 229 270 - -
Cati3g00076 385 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 360 IPR045881 -
Cati3g00076 385 MobiDBLite consensus disorder prediction 231 265 - -
Cati3g00076 385 MobiDBLite consensus disorder prediction 13 38 - -
Cati3g00076 385 MobiDBLite consensus disorder prediction 363 385 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00076 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
914992 Cati Cati3g00074 Cati-Chr3:338026 Cati3g00076 Cati-Chr3:338026