AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00079 ATCTCTCCCCTTTCTCTCTTTTCTTTTCCTTTTTTTTTATTAATTATTTAGATTTGCATAAGAGTCAAGACCACTATCGATGAATTGGTAAGGTATTGATAAGATAGTGGAAAGTTGATGCGGCGCTAGCTGGTATCAACCATTTGCACCAAGCATGACCACCGAGAATGGTCTAACAGAAAATAACTCATTTGCGTCAAATCAGGGGTGGTGTTTGGGGTTGATGGCTGATTTTGAAGCACCTTCATTCTCTCTAGGGCTTGATTGTGATGATTCCGACCTCCAAATCGGTTTTGCAACCCAAAATACACATTCATACTCGTCGAATCACTTACCCATAGCTTCTGCAACCGTCAAAGATGACGATCTTGAAACCCTAATTGTCGACGATTCGGAGCCTGAATATCCGGATCCTCATCCAAAGCGCCGTCGGCGTCTACTCACCGTTCCGGCCAACACTAAGGCGGAGTTGCATTCTACGGCCGTTGTCGATCATCAAGATGTCGATACGGGTTTAAGTAAGGAGCAAAAAGTAGTCGAATCAATTGATGTATCAACTACAGAGAATCCATGGGAAGATTACAGATCCATGAAACATGAAACTCATGTTGTACAAGCTAATCGAAGCAGCCGTGTAACAAGAATTTCTTTACATCCGGATGACTCTTTTCCCCCTGCTCATCGTTATTTCTTTCATAACGATTCAAGGATCCAAGAGCTTGTTCGAAATCGCCTGCCTAATTTTTCTCCTTTGAGCAACAGCGATTGCGACCATCATCCGTGTACATCAACAATCGATTACAAGGGCCAATTTAGCCATGGTGAAAGTTCTAATAGAAAGAATAAAGACGAGAAAAGCTCAAGTAGTAGGAAAACTTCAAAAAAATCAAAGATTGAAGAGGAGTCACAAGGTTGGGTGAATCCAAAGCTTAGTATCAATAAAGGATTAACAAAAGGAACCACGAAAAGAAAAGCGTATGCAGTCCGACAAACTGCCGGGCATTGGTTCACAGACCTTGATGGAAAGAAAGAAAGTGGAGCAGGATTTAAAAAGGCAAAAAAGAGGAAATCTGCTAAAACTTGAATGATGCTGGATTCTGCCCTTCATATTGGTTTGTTCTCTTTCCAAGTGCACCCCATTTTCTTGAATACACGATCAAACGAAACCAAGTAGTAGGGTGTTTTTGGTACGTGGGACCGAGCTCAACAAAACAAAGGAAACGTTGTCACGTCCCTCCCATATTTTTCCCCTTGGATTTGGACACGGGATAGAACATAATACACAACATTGGATTTGGACAAGCTGGGACTTAAGTGGGAAAAAGATGCAACTTTTTGGTCTCACTGAAATTGGTGGAACAAAAAGAGGGGATGAGATTAAGGGGCGGACAGCCTAACGAGCTTAATGAGCTTAATGAGACTTTTGTCAAGTTATACATGGCTTTTTGGTAGCGGCTTAATGATCTTGAAAGTAATTTGTTGGTAAGCTTCTAATGGGGGGACCTTTATGCATGGGCTGACCTAATACATTGCATAACCATTTTGTTCCTCCATCATAGTGTAAAAAATTACAGGGTTGTGAAAGGTGGTGCCACTGTATCAATTTGTCGTGTGCCATCGTGTATATTTTGGAACTGCGATAATGACATAAAT 1653 41.38 MTTENGLTENNSFASNQGWCLGLMADFEAPSFSLGLDCDDSDLQIGFATQNTHSYSSNHLPIASATVKDDDLETLIVDDSEPEYPDPHPKRRRRLLTVPANTKAELHSTAVVDHQDVDTGLSKEQKVVESIDVSTTENPWEDYRSMKHETHVVQANRSSRVTRISLHPDDSFPPAHRYFFHNDSRIQELVRNRLPNFSPLSNSDCDHHPCTSTIDYKGQFSHGESSNRKNKDEKSSSSRKTSKKSKIEEESQGWVNPKLSINKGLTKGTTKRKAYAVRQTAGHWFTDLDGKKESGAGFKKAKKRKSAKT 309
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00079 309 PANTHER RHO GTPASE-ACTIVATING PROTEIN 24 132 - -
Cati3g00079 309 MobiDBLite consensus disorder prediction 216 274 - -
Cati3g00079 309 MobiDBLite consensus disorder prediction 222 251 - -
Cati3g00079 309 MobiDBLite consensus disorder prediction 286 309 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00079 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
895818 Cati Cati3g00079 Cati-Chr3:356823 Cati7g03392 Cati-Chr7:71154368
920874 Cati Cati3g00078 Cati-Chr3:356823 Cati3g00079 Cati-Chr3:356823