AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00120 TGAAGATGATCAACACACGAACACACATTCATCTTCAACCCAATCTTCATCTTCTTCATCAGAATTAAACCCTAAAACTTCTTTCATCTTCCAATTCCCATGGCTTTTACTGTAATCCCTAATCTATCCCCTCCATCCTTCACTCGAATTCATCTTCATAATCATCACCATCAATCGTTATTACATAAACCTTCTTCTTCTTCTTCTTCGTCATCTAATTCTGCAATCCACCATAACCACCACCACCATTCCCAGCTGCCTCTGCAATCCGTCGAGCCGCCGCCGGTTCGCGGCCGCGTCTCTCCGCCGCGCGATCCCCGCCAGGACTTCTACGTTAATCTCGGCTTAGCCGTTCGAACTCTCCGCCATGATCTGCCTCTGCTTTTCTCCACGGATCTCAATTATGAAATCTACAGGGATGATATCACCTTCGTTGATCCTCTAAACCAATTCACCGGCATCCACAACTACAAACTCATCTTCAGTGCATTACGTTTTCACGGCCGTATCCTATTCAAAGAGATCTCCTTCGAGATCTTTAGGGTTTGGCAGCCATCCGAGAATCTAATACTAATCCGATGGAGCCTCAAGGGCGTCCCTCGCGTCCCCTGGGAAGCCAAGGGTGAATTCCAAGGCACATCTCGCTACAAATTGGACAGAAACGGAAAAATCTACGAGCATAAAGTCGATAACTTGGCTTTCAACCTCCCACAACAGCTAAAACCCGCTATATCCGTACTCGATTTGGTGTCTGCTTCCCCTGCAACTCCTAACCCTACATTCTCTTGGGGGATCGCGGATTCCACAAGTTATTCATCTTCATGGCTAGATTTCTATCGGGCGGTTAAGAACACGTTGGATCCTAGTCAAGATTCTCCGGGTTTGCAGGATTGCCAACTAGTTGCTGCTACTTGTTTATACTTGATGGAATCTCAAGATCATCTCGGAGCAATCCCTGGATAA 963 46.63 MAFTVIPNLSPPSFTRIHLHNHHHQSLLHKPSSSSSSSSNSAIHHNHHHHSQLPLQSVEPPPVRGRVSPPRDPRQDFYVNLGLAVRTLRHDLPLLFSTDLNYEIYRDDITFVDPLNQFTGIHNYKLIFSALRFHGRILFKEISFEIFRVWQPSENLILIRWSLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNLPQQLKPAISVLDLVSASPATPNPTFSWGIADSTSYSSSWLDFYRAVKNTLDPSQDSPGLQDCQLVAATCLYLMESQDHLGAIPG 287
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00120 287 Pfam Uncharacterized conserved protein (DUF2358) 84 194 IPR018790 -
Cati3g00120 287 MobiDBLite consensus disorder prediction 25 72 - -
Cati3g00120 287 SUPERFAMILY NTF2-like 99 195 IPR032710 -
Cati3g00120 287 Gene3D - 97 210 - -
Cati3g00120 287 MobiDBLite consensus disorder prediction 28 42 - -
Cati3g00120 287 PANTHER RIKEN CDNA 2310061I04 GENE 25 218 IPR018790 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00120 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:592700 Cati3g02034 Cati-Chr3:59926498 dispersed