Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00123 | GAAAAAGTTGCTCTTCAGTCCTTGAAGGCCAGTGAATGGCATCTTGATGGAGCATTTGATGTATTCTACAGCCAACCTCACACCAAATCGTTTACAGATACGAGACATTTAGAGGAATTGTACAATAGATACAAAGGCACGTCATCTGCCTGCCTTCATGATCCCATTCTCATCTTATATCAGAGTGGTGCTGTTGCCCGATTAGACAGTGGCAGCTTGGTTTTTGATCCTTATGCTGATATGATTATGGCTGATGGTATTAGTACCCTCTGCAATGATGTTCAGGTGGATCCTCAAGATATTGTTATGTTGGTTGTTTCTTGGCACATGAAGGCTGCTACCATGTGTGAATTCTCAAAGCAGGAATTTGTTGGTGGCTTGCAAGCTCTTGGGATAGATTCACTGGAGAAATTCCGTGAACGGATACCATTCATGCGTTCTGAGCTGAAAGATGATCAAAAATTCAAGGAGATATACAATTTTGCATTCGGCTGGGCAAAGGAGAAGGGTCAGAAGTCTCTGGCATTGGATACAGCAATAGGGATGTGGCAACTGCTGTTTGAAGAAAAGCAATGGCCATTGGTTGATCATTGGTGCCAGTTCTTACAGGCACGGCATAATAAAGCTATTTCTCGAGACACTTGGTCTCAGCTACTGGAATTTGCAAGAAGTGTGGATCCTACACTATCGAATTATGATGCTGAAGGTGCGTGGCCGTATCTAATCGATGAATTTGTCGAGTATTTAACAGAAAACAACATAATTCAAAAGGGTCATCATGTGAAAGATTGGGGTCAGAAGTTCTAAGAGTCCAGATTTGGTCTGCTTCTTCATTTGCAAGTAAGTCTCGCATCGATTCATCATTGAAAAACCGAAATATATGTATAAAACACAAAAAAGGAAGTAGCTTGTGTATGAATTATGATGGCTGGGCGATTGTTAGAACTTTTAATTCATTTGTCAAAAACCTTCGAGGAGTTTGTTTGGTTTGGATTCGTTTTTATTGCATTTTATATGTTTAAGTAATTGAAAAAAATGGAAGTCATTGTTTAAATGTTTGAT | 1062 | 39.64 | EKVALQSLKASEWHLDGAFDVFYSQPHTKSFTDTRHLEELYNRYKGTSSACLHDPILILYQSGAVARLDSGSLVFDPYADMIMADGISTLCNDVQVDPQDIVMLVVSWHMKAATMCEFSKQEFVGGLQALGIDSLEKFRERIPFMRSELKDDQKFKEIYNFAFGWAKEKGQKSLALDTAIGMWQLLFEEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFARSVDPTLSNYDAEGAWPYLIDEFVEYLTENNIIQKGHHVKDWGQKF | 268 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00123 | 268 | Gene3D | - | 33 | 150 | - | - | |
| Cati3g00123 | 268 | Gene3D | Cullin, PONY binding domain | 151 | 259 | IPR042460 | - | |
| Cati3g00123 | 268 | ProSiteProfiles | DCUN1 domain profile. | 32 | 250 | IPR005176 | - | |
| Cati3g00123 | 268 | PANTHER | RP42 RELATED | 2 | 252 | IPR014764 | GO:0000151(PANTHER)|GO:0031624(PANTHER)|GO:0032182(PANTHER)|GO:0045116(PANTHER)|GO:0097602(PANTHER) | |
| Cati3g00123 | 268 | FunFam | Defective in cullin neddylation protein | 151 | 256 | - | - | |
| Cati3g00123 | 268 | Pfam | Cullin binding | 138 | 248 | IPR005176 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00123 | K17822 | DCN1-like protein 1/2 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:608323 | Cati3g00123 | Cati-Chr3:610039 | tandem |