Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00133	GGTGATAGTAGCAGAGAGAGAGTAGGGCATGCAACAAAATCGAATTGCAGCAGCAACCCCAAAAACCCTTTGGCGATTTTGGCTCACCTTTCCCTTCGAAACTATATATATATCTCTACAATCTCCACAATACAACTGTTCTTTGCCCTCTGTGTATCGATTCCCGTGAACCCAATCTTTCGATTTATCGGCGGTTTCCAGTAATCAAGAAGAAATGAGCAGCTGGAGGAGTCTGATCTTGCGAATCGGCGATAAGTCCCCTGAATATGGTGGAACCATCGATTACAAAGACCACATTGATGCTTGTTTTGGTGTGGTTCGGCGGGAGCTGGAGCATTCTGAAGAAGAAATCTTAATTTTTCTTCTACAATGTTCAGAGCAATTGCCTCATAAGATTCCTCTGTATGGGACACTGATTGGGTTATTGAACTTGGAAAATGAGGAGCTTGTAAAGAAAATCTTGGAGAGTACTCAAAAGAGTTTGCAGGATGCACTTGACTCCGGAGACTGTAACAAGATCCGTGTATTAATGCGGTTTTTGACTGTTTTGATGTGTAGCAAAGTCGTTCAACCGAGTTCACTAGTGGTGGTTTTTGAGACGCTATTATCTTCTGCTGCAACTATAGTCGATGATGAGAAAGGGAACCCGTCATGGCAAGCACGTGCCGATTTCTACATAACGTGCATTCTTTCATGCCTTCCTTGGGGTGGATCTGAACTTGGCGAGCAAATTCCGGAAGAGATTGAAAGAGTTATGGTTGGCATAGAAGCCTATCTAAGTATCAGAAGACGTGTTTCTGATGTTGGTCTATCGGTTTTTGAGGATATCAACAAAATCGATAAAGTTCATGTTGAACAGGATTTTGTGGAAGACTTGTGGAGTCGAATCCAAGATCTTTCCAAGAACAGCTGGAAACTTGAGAGTGTTCCAAGGCCACATCTTTTATACGAAGCACAACTAGTAGCAGGCAAGTCTCATGATATTGGACCCATCAGTTGTCCTGAGCAACCTGATATCGGGGAACTTTCTGGAGTCAGTTTTGGTAGACAAAAGCATGAGGCAGAATTGAAATATCCTCAGAGGATAAGAAGGCTCAATATATTTTCCGCTAACAAAACTGAGGATCTACAGCCTATAGATCGCTTTGTTGTGGAAGAGTATTTATTGGATGTGCTCTTTTTCTTGAATGGATGTCGAAAGGAATGTGCTGCATGCATGGTTGGTCTACCCGTCCCTTTTAGATACGAATATCTCATGGCTGAGACCATTTTCTCTCAGTCCCTTCCGGGTGCCTTCCCTGCAGTTGTAGCTGGGGCAGTTCGTGCCCTTTTTGATAGAATAAGCGAGTTGGATATGGAGTGCCGGACACGCCTCATTCTTTGGTTCTCACATCACTTATCAAACTTTCAGTTCATCTGGCCATGGGAAGAATGGGCTTACGTCTTGGAGCTTCCAAAATGGGCTCCACAACGTGTGTTTGTCCAAGAGGTTTTGGATAGAGAAGTCCGTTTATCGTACTGGGATAAAGTAAAGCAGAGCATTGAAAATACTCCAGCTTTAGAGGAGTTACTTCCACCAAAAGGTGTTCCCGACTTCAGATATGGTTCAGAAGATGACGATAAAACCGAGTACGCACTTTCGACCGAACTTAACGGCATGGTGAAAGGAAGAAAAACGGCACGTGATGTTATCACTTGGCTTGAAGAAAGTGTAAGCCCTGTTAATGGACCGGATGTTGCCCTCAGAGTGGTTGTTCAGACTCTTCTGGACATTGGATCAAAGAGTTTTACCCATTTGATTACCGTATTGGAGAGGTATGGACAAGTCATAGCGAGAATTTGTCCGGATGAAGAAAGTCAAATTACGTTGATAGCCGAAGTTGGCTCGTTTTGGAAGAATAGTGCTCAATCGACGGCCATAACGATTGATAGAATGATGGGTTATCGGCTTATATCGAATTTGGCTATTGTCAAATGGGTTTTTTCTCCACCAAATATCGAGCTATTTCACACCACGGATCGTTTATGGGAGATTCTCAGAAATGCCCTTAATAAAACGTACAATCGCATATCTGATCTAAGGAAAGAGATTTCTCATCTGAAAAAGAGTGTTATAAGTGTCGAGCGAAATGCAGCAAAGGCGAAAGCTGAGTTGGATGCTGCTGAAATGAAACTCATGCTTGTGGATGGTGAGCCTGTTGTCGGCGAAAATCCTGCTAGAATGAAACGTTTGAAATCAAACGCTGCAAAGACAAAGGAGGAGGAGGTATCTACACGCGAATCTTTGGAGTCGAAGGAGGCCCTTTTTGGACGAGCTCTTGAAGAAAATGAGGACTGGGCGGTGAGTGAGAGAGGCAGGGGTGAAAGAATTCCGGAAGGTTTTAGGGTTTTAGGGCCTGCCCTATTTCTCTCATTATATAAAAATTTCTCCAACGTTTTGATGGATCGCCTCCATGAAACATTTGGAGACAAAACTTCGGAGCCGACTGGTGATGCAGAAGCAATGGCGGTCGATGAAGATGACACATCTGCCATGGAGACGGATAAAGAAAATGGTGGTTCCAAGAGAAATGTCGGCAATAAGAGAAACGTGGGTGGTACCGAATACGTTGTAGAGGAGAAAGAACAATGGTGTTTGTCGACTTTGGGTTATCTAAAGGCTTTTTCGAGGCAATATGCTTCTGAGATATGGCCACACATGGATAAGTTGGAGGAGGAAGTATTAACGGAAAGTGTTCATCCGCTATTCAGAAACGCGGTTTATTCTGGTTTGCGTCTACACAACGGTCAATGATTCTAGTTGATTTTGTTTTAGAAAATGAGTTTTAAGTTTGTGAGTTGTACCAAATTTATTTATGGTTGTAATGTACAAATGCTATATTCATATAAGAAACATGTTGGGTGGTTGCTACAACCACTAGTAGTAGTTAGTGGATATGGCCATTTTTTAATGAAACAGATTAGCTCTTTTTTCTGATGTCATATGCATATTTCAAAGTATTGCACATTATTTGTGTTTTTGAAATATATGATTAATTGTATTATGATACTTATAAGTTAAAACTTAAAAGAAAGTCAAAACTTGATTTCATATAACTAATACAGATATCG	3111	41.82	MSSWRSLILRIGDKSPEYGGTIDYKDHIDACFGVVRRELEHSEEEILIFLLQCSEQLPHKIPLYGTLIGLLNLENEELVKKILESTQKSLQDALDSGDCNKIRVLMRFLTVLMCSKVVQPSSLVVVFETLLSSAATIVDDEKGNPSWQARADFYITCILSCLPWGGSELGEQIPEEIERVMVGIEAYLSIRRRVSDVGLSVFEDINKIDKVHVEQDFVEDLWSRIQDLSKNSWKLESVPRPHLLYEAQLVAGKSHDIGPISCPEQPDIGELSGVSFGRQKHEAELKYPQRIRRLNIFSANKTEDLQPIDRFVVEEYLLDVLFFLNGCRKECAACMVGLPVPFRYEYLMAETIFSQSLPGAFPAVVAGAVRALFDRISELDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLELPKWAPQRVFVQEVLDREVRLSYWDKVKQSIENTPALEELLPPKGVPDFRYGSEDDDKTEYALSTELNGMVKGRKTARDVITWLEESVSPVNGPDVALRVVVQTLLDIGSKSFTHLITVLERYGQVIARICPDEESQITLIAEVGSFWKNSAQSTAITIDRMMGYRLISNLAIVKWVFSPPNIELFHTTDRLWEILRNALNKTYNRISDLRKEISHLKKSVISVERNAAKAKAELDAAEMKLMLVDGEPVVGENPARMKRLKSNAAKTKEEEVSTRESLESKEALFGRALEENEDWAVSERGRGERIPEGFRVLGPALFLSLYKNFSNVLMDRLHETFGDKTSEPTGDAEAMAVDEDDTSAMETDKENGGSKRNVGNKRNVGGTEYVVEEKEQWCLSTLGYLKAFSRQYASEIWPHMDKLEEEVLTESVHPLFRNAVYSGLRLHNGQ	859

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00133	859	Gene3D	-	465	850	-	-
	Cati3g00133	859	Pfam	MIF4G domain	24	223	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Cati3g00133	859	Pfam	MIF4G like	467	667	IPR015174	GO:0016070(InterPro)
	Cati3g00133	859	SUPERFAMILY	ARM repeat	454	847	IPR016024	-
	Cati3g00133	859	SUPERFAMILY	ARM repeat	2	295	IPR016024	-
	Cati3g00133	859	Gene3D	-	3	268	-	-
	Cati3g00133	859	Gene3D	-	357	457	-	-
	Cati3g00133	859	Gene3D	-	295	356	-	-
	Cati3g00133	859	SUPERFAMILY	ARM repeat	292	454	IPR016024	-
	Cati3g00133	859	Coils	Coil	612	653	-	-
	Cati3g00133	859	PANTHER	CAP BINDING PROTEIN	357	854	IPR027159	GO:0000184(PANTHER)\|GO:0000339(PANTHER)\|GO:0000339(InterPro)\|GO:0003729(PANTHER)\|GO:0005634(PANTHER)\|GO:0005845(PANTHER)\|GO:0005846(PANTHER)\|GO:0005846(InterPro)\|GO:0006406(InterPro)
	Cati3g00133	859	Pfam	MIF4G like	355	443	IPR015172	GO:0016070(InterPro)
	Cati3g00133	859	SMART	if4-15	1	229	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Cati3g00133	859	FunFam	Nuclear cap-binding protein subunit 1	3	268	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00133	K12882	nuclear cap-binding protein subunit 1