Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00141 | ATGTGTAAAAGCCTGAAAAAGGCTTCTAATGGTGTTGTAATTGCAACAGAAAAGAAACTCCCATCCATTTTAGTTGATGAGACCTCTGTGCAAAAGATTCAGATTTTGACTCCTAACATTGGAGTTGTATACAGTGGCATGGGGCCCGATTCTCGAGTTCTGGTCAGAAAGAGTAGGAAGCAGGCAGAGCAGTACAATCGGCTTGGTGTAAGGCCTTTTGGTGTCTCACTCCTTGTTGCCGGTTTTGATGACAAGGGTCCCCAGCTATATCAGGTGGATCCCTCAGGATCATATTTCTCCTGGAAAGCTTCGGCCATGGGAAAGAACGTGTCCAATGCTAAGACATTTCTTGAAAAGAGGTACACCGATGATATGGAGCTTGAGGATGCGATACACACGGCTATCTTAACATTGAAGGAGGGAGTCCTAACTGCTGCTCAAATTGAAGACTATCTTCAGGAGGTGGAATAGTTATTTGTCATCTTATTAAAACATTGAACAATTGTTTCTTTTTTGGTCTGTCTTGTAATATTCGGTCTTGTTTTGGTGAACATTGAACAATTGTTCTTGTGTTGTCGTGTTCTGTCGTATCTCGTGTTGTCCTGTTCTGTTTGGGTACCCAACACACCTTAGGGGTGCGTTTGGTATCGGGACATGATGAAACAAAACATGATAGGACAGAACTAACTTATCTCTAATGAG | 702 | 42.45 | MCKSLKKASNGVVIATEKKLPSILVDETSVQKIQILTPNIGVVYSGMGPDSRVLVRKSRKQAEQYNRLGVRPFGVSLLVAGFDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELEDAIHTAILTLKEGVLTAAQIEDYLQEVE | 156 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00141 | 156 | Gene3D | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | 66 | 155 | IPR029055 | - | |
| Cati3g00141 | 156 | ProSiteProfiles | Proteasome alpha-type subunit profile. | 1 | 156 | IPR023332 | - | |
| Cati3g00141 | 156 | Pfam | Proteasome subunit | 7 | 66 | IPR001353 | GO:0005839(InterPro)|GO:0051603(InterPro) | |
| Cati3g00141 | 156 | Pfam | Proteasome subunit | 67 | 141 | IPR001353 | GO:0005839(InterPro)|GO:0051603(InterPro) | |
| Cati3g00141 | 156 | PANTHER | PROTEASOME SUBUNIT ALPHA-BETA | 7 | 66 | IPR050115 | GO:0010498(PANTHER)|GO:0019773(PANTHER) | |
| Cati3g00141 | 156 | Gene3D | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | 6 | 65 | IPR029055 | - | |
| Cati3g00141 | 156 | SUPERFAMILY | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 7 | 142 | IPR029055 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00141 | K02726 | 20S proteasome subunit alpha 2 [EC:3.4.25.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:789871 | Cati3g01968 | Cati-Chr3:57460263 | dispersed | |
| Cati | Cati-Chr3:765505 | Cati3g00141 | Cati-Chr3:789871 | tandem |