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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00143 ATGGCATACCTCTTTTCAAGAAATGTCTTAGCATTGGACACGTTCTTTCCCATGGCCGAAGCTTTCCAGGAGAAATATGATCCTGAGGGATCCACCTACACCAAATGCATGCAAGCTTTCAATGAGATACATTCTTTAAAAAGACTAAAAGAATCGAAGAGTGATAAGAAAGAGAAGCACAAATCGCGTAAATCTTCAAGTAGTAGTAAAGAAAAGAAGCCGGAGGAGAAGCACAAGCACAAACATAAACGCCATAAGCATGACCGCCGTGTGATATCTAATTTCAAGGAGCTGTCGGACGCTGATTATTTCTTAAAAAACAATGAGTTTTCTACTTGGTTGAAAGACGAGAGAGACACGTTCTTCTCGGATCTTTCTTCAGAGTCAGCACGGAAACTATTTGCAGAATTTGTCAAAGATTGGAATAACAAAAAGCTTGATTCCAAATTCTACGATGGCATTGTGACAGCTCCACGATCATCCCATAATTGGAAAATCAAACCCAAAGTTTTTCTTGCAATTTGA 525 39.24 MAYLFSRNVLALDTFFPMAEAFQEKYDPEGSTYTKCMQAFNEIHSLKRLKESKSDKKEKHKSRKSSSSSKEKKPEEKHKHKHKRHKHDRRVISNFKELSDADYFLKNNEFSTWLKDERDTFFSDLSSESARKLFAEFVKDWNNKKLDSKFYDGIVTAPRSSHNWKIKPKVFLAI 174
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00143 174 MobiDBLite consensus disorder prediction 75 89 - -
Cati3g00143 174 MobiDBLite consensus disorder prediction 47 74 - -
Cati3g00143 174 PANTHER STYLE CELL-CYCLE INHIBITOR 1 51 168 IPR044688 -
Cati3g00143 174 MobiDBLite consensus disorder prediction 47 89 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00143 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:793266 Cati3g00143 Cati-Chr3:793266 tandem
Cati Cati-Chr3:793266 Cati3g00144 Cati-Chr3:793266 tandem