AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00152 TTGTTGGGGGCATCTTTCCCACCTGCAACCTAATTCGTACAACAATCTGCAGAGCTTCCTTCCAAAATCCATTAGGGTTTTTTCATTCAGTTCATCATCTAGAAGGCCAAATTGGGGGAGAATTCTAGGGTTTTTGATCCAGTAGTTGATGATGTCGGAGCTCAGCAGCACAGTTAGCACGGCCACCGGTCCGGATTTTGACCTACCGGACGAGATACTGTCGGTGATGCCGACGGATCCCTACGACCAGCTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTCGCATCACGCGTTTCGAAGCTGGAGTCGGAGGCAGGGAGGTTGAGGCAGAAGGTGGAGGAGAAGGATCGTGTGGTGGCGGAGCTTGAAGGAAAAGTCACCGAGCTTCAGCAGACGTGTCATAATGCTCAGTTGCGGTTGCAGATGACGCTCGAAGATAATGCGAAGCTTAAGGAGGAGAGAGATTCGTTGGCTATGGCGACTAAGAAGTTAGGGCGCGATTTATCTAAGCTGGAGACGTTCAAGCGACAATTAATGCAGTCATTAAATGACAATGATTCAACTCAAGCAACAACTGTAGATATAGGCACCTATGACCAATCTGCTACCAGAGCTTATGCCGTTAAAGCCTCAAAGCATGCAGGTCAAAGGTTTTCCATGATACCCCCCCATATCAGTGCACGTGCAACTCCAACTGCAACTCCCAAGACGATCTCTGCGAGTGTATCGCCTAGAAGATATTCTGCTTCTGGTGCTACATCTCCAACAAAGTTTCAATACGAAGGGCGCCGTGCCCCTAAGATTGATGGAAAGGAGGTCTTCCGTCAAGCAAGGAGCCGTCTATCTTATGAGCAATTCAGTGCTTTTCTGACAAATATAAAGGAATTAAATGCTCAAAAACAGTCTCGCGAGGAGACTCTGAGGAAGGCAGAAGAAATATTCGGGACTGAGAACAAGGATCTTTATCTATCGTTTCTAGGTCTGCTAAATCGCAACAAGCAATGAAGATATCGTTGATGGATATATATTTTGTTTATAAATGCGTACGGCAAAGAATCTGATGACATGAAGTCGTAAGGATTAATTGAAGTAATGGGAAGCTAAAGGTCTGTATAGGTTTAGTTTTTGGCTATTTCATGGCTGTATGAAATGTAGAATACTTGATATCTTATCTGCAATTCTGCACTGTGCACTTGAATTCATTACATAATGATCCATCAACTGTTTTCAGTTTTCTTGCATGCAGTTTATCTAATTATCTTTTTTGAAGTAATATAATATTTATATACGATAAATACTCACGTGTACTCCCCAGTCCCCACCCTTGGTGAGGTTTGAAACAGGG 1349 44.11 MMSELSSTVSTATGPDFDLPDEILSVMPTDPYDQLDLARKITSMALASRVSKLESEAGRLRQKVEEKDRVVAELEGKVTELQQTCHNAQLRLQMTLEDNAKLKEERDSLAMATKKLGRDLSKLETFKRQLMQSLNDNDSTQATTVDIGTYDQSATRAYAVKASKHAGQRFSMIPPHISARATPTATPKTISASVSPRRYSASGATSPTKFQYEGRRAPKIDGKEVFRQARSRLSYEQFSAFLTNIKELNAQKQSREETLRKAEEIFGTENKDLYLSFLGLLNRNKQ 286
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00152 286 Coils Coil 245 265 - -
Cati3g00152 286 PANTHER OS03G0659800 PROTEIN 11 215 - -
Cati3g00152 286 Coils Coil 50 105 - -
Cati3g00152 286 MobiDBLite consensus disorder prediction 182 209 - -
Cati3g00152 286 MobiDBLite consensus disorder prediction 179 209 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00152 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:969617 Cati3g03044 Cati-Chr3:89911909 dispersed