Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00181 | CAGCATGGTAATCACTGGTTGATGATTATAGGTTTTGGCTGATTAAATTCAGGGGGGAGCTGCCATCTTCAGCATTCAGCATTCAGAAGTAGAATTGAAGAAATGGCAGCCACAATGATGTCCTCAGTAAGCCTAAAGCCTTCTCCATTCAGCATTCAGAAGCCAGCAGCCAAAGGCCTTCCTTCACTTGCAAGAACCTCCTTCAAGATTCAAGCCAGTGGTATCAAGAAGATCAAGACTGACAAGCCTTATGGAATTGGAGGAGGAATGCAATTGAGAGACGGTAAAGATGCCAACGGAAGAAAGCCAACGGGAAAGGGAGTCTACCAATTTGTTGACAAGTACGGTGCTAACGTCGATGGATACAGTCCCATCTACAACGAAGAGGAATGGTCTCCAAGTGGTGATGTCTACGTTGGTGGCACAACTGGGTTGTTGATATGGGCTGTTACTTTGGCTGGAATTCTTGGAGGGGGTGCTCTTCTGGTTTACAGCACAAGTGCTTTGGCACAGTAAAAATCTCCACAAGTTGTTCATTTGGCAAACTTGTAGTTACTATTTGTTATATTTTGTTCCATTTAATGGAACTATTTATGCAAACATGTACAATATAACACCAAATCTTGTTCTTGTTTGCTATGCTTCTGAAACCAAATTATAGTCTTCTTCTAGTAATTTCATTCTTCTTATTCTTTCTTGTAGCTAGAAATCTTGGGGGGTAAAAACATAAAATGGCACCCAATTGGGTGGTTTTTACAGAGGGGTGAACATAGTACAATACCATGTTACTCCTGCTATATTGTGTACC | 808 | 41.46 | MAATMMSSVSLKPSPFSIQKPAAKGLPSLARTSFKIQASGIKKIKTDKPYGIGGGMQLRDGKDANGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWSPSGDVYVGGTTGLLIWAVTLAGILGGGALLVYSTSALAQ | 137 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00181 | 137 | PANTHER | PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC | 1 | 137 | IPR006814 | GO:0009523(InterPro)|GO:0009654(InterPro)|GO:0015979(InterPro)|GO:0042651(InterPro) | |
| Cati3g00181 | 137 | Pfam | Photosystem II 10 kDa polypeptide PsbR | 39 | 136 | IPR006814 | GO:0009523(InterPro)|GO:0009654(InterPro)|GO:0015979(InterPro)|GO:0042651(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00181 | K03541 | photosystem II 10kDa protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:1400055 | Cati9g01677 | Cati-Chr9:17725927 | wgd |