AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00197 TCCATTGAAACAAACACCCAACCAAAAACACACACACACACACTGGATGGTTTCTCTCTCCGCCGTGTCATCAATGGCGATCGAAGCTTTTTCCCTCAAATTCGCCACCTCCTAACTTCACTCTCCGCCACCACAATCCACTAACGCCGCCGCAATCCACCGCCGGAGACGCATAATCACTTCATAAACCCCCGTTTCCCTTCCCTTCCTTCAGCCACCAACCAAAACCCCTAAATTTCCTCCACCATCACAGGTACGTCAACGAATATACTCATACTAGTTCAAAGAAGTCACGTTTAAGTCTCCGAAATCATCACTTGATTTCAGAGTTTCAATTAATTTCTCCACAGGAATCGAGAATTCGAGATCCAAGTAATCGCTCGATTTCAAGTAATCTCTCGATTTTAGTAGTTGAATCCTTTTGAATGTTTATAGAAATAGTTGAATACCTGTAGATTTACGTGTTTGTTTTGATCTGATTGTTTAAGGAATTTGGTGGATTCAGTTGAGTACAAGTTGTTTAGCGTATAGTTCATCCGGTTTTCGCCGGTTTTTAGGGCAAAATTATCAGATAAATTTCATATTTGGAATTTAGGATTTAGGAGTTATGCAAAGGCATCGTAATCCTGCGAATGGATATAGGTCGAATCCTATCGGAATCGGTGGTGGTGGTGGTGGTATAGCTGCCGGTGGTCCTGGATACCGTAGCTACAATCGCGGTGGTTTCGGTCGTGGTCAGCCGAAGGTTTTCCAGTCGGGGAATTCGCAACCCCCTCCACCTCGGAGGGTTGATGTTTTCATGGAGGCTGGGAAACTAGCAACGGAGTATTTAGTTTCGAAAGGCATACTACCGCCGAATTCGGTTAATGGGAAATGGCAAGGTAGTAATTTAAAGAGTCAGATCGGTGGTGGTGATGGTGTTCCCGATGCGGATTCCGGCACTGGTGGTGGTCGGAGAAGGTTTCCAGATGATTACGGTAGTGCGACGGGGTCAAGAGATGGGGTTAGGGCTAGAAGAACAATGGGGTCTTTTAAAAACCCTGGGTTTGAATGGAATCGCGAAATTAGCCGGAGTTCTTCGTTGTCGGAAAAAGTTAAGCCCTCTTTAGATAAACAAGGGGATGGTGATTCGGTTTCTGGATCGGTGGAAGAACAGAGATCCGCCGGGAAAGATGGTGCTATTGAGGACCAAAAATCGGTTTCTGGGGATTTAGAGTCAAGAAATTCCGAAGCAGGTAACTTAGAAACAGCCATTGATAACAAACCAAACGAATTACCTGAGGATAATGCAGGTATTAAAACCCCGATTTCAGATGTTGAATCCGCTGAGAAGAGTGATAGTTTGAAGGTCCCAAATGCATCCGAGGTGATTATAGATGATGATAAAAGAGAGTCTGATAAACCGATTGTTAAAGAAGAACCAGCCCAGGAGCATAGCACAGATGAGAATAACAACACTTCTGCAAACAAGACTAGTAGCGATTTGTTAACGCTAATCAGGTTTAACAAAGTACCCACCAGAACCCGTTCTTCAGTGACACTTAAAGGCTCAAAGAGCGACTCACTTTTGACTTCTGGAGATGAAAACAAGAACAAAATCCAGAATTCTGGAGAACCCGCAACTTCTTTGCAGGATGTTACAACAGCAGATGAAAATCAAGAACCGAACCATGAACTGAAGATCGAAGAAGTCCCAATTGAAGAGGAGGCTGCACAAATGGATCATAAGTACAATTTTGGATCTCGATCTCAATCTTTTCCTCAAAGATCCTCCGTTACAGATGAAGAGTTAGGTGAAGAACAGCATGGGTATAATAGATCCAGCTCTGTTGTTTTGGGTAGAGGTGAAAAACGACCATTGCATCTCAGTGATAGCCCGGAATCGGCCAAGAAGCCGAGAGATTGGACCTCAGGTGACGGTTACTTGCATCTTTCTAACTCAAGAGAAGACCAACCATCAGGAATCACTCAACCATGCAATGTTTATGCAGAAGAGAAGCAGCTTTTTCCGAATTCTTTCAAGATTTGTGACCTCAATTTGATGGAAGTTTCTGATGTAAACGATAATCATGACACCAATTCCGTCATTGGTTTTTCTTCAATCAGACAACCAAAGCAAGAACCGGGGTCGGTTGATTTTGATTTGACCATGAATAGTAGTTGTGACATAACCGATAGACAAACTAGGCGTGGAGCTGATGACAAAGGGGTTGAAGTCATTGATTTGGATTGTGATTCCGGGCAAGACGACAAGGGTTTCAATAACTCGGAACGAAGGGAGGAAGCCATATTTACGGATCTTGAGAGCTTTCCCGATAGCATGCAGAGGGTTAGTGACCTGCCCCAAGATGGTTATGGGCTTATGATATCGGAGTTACTGGAGGCCGATATTCCTAACTCTACTGTACCAACTGGTGTTAATTCAATGCATAATGAAATGAGCTTGCAGAATGATGAGGGGATTCTTGGTGATGACGAGTCGATATATATGTCGCTTGGAGAAATACCGATAAGTTTTGTGCCGGTCTGGGATCAGCAGCCATCACAGGGATACGATAAACGCTATTAGGACGGCTAACGTCCGCAATATATAGGTACGTAATGTGGTATGTAACAGATAATGCTTCGATCATGAGATTATTATTATATGGTTACTTTAGGATAGTTTTAAATACATGACATTGCTCGTAATCCTGATACGAGACCGAAGCCTGATCTGTTTAACGTTTTCGGGTTCTTACATTTGTGTTTGAATGAAAGTATATGTTGTCGATTCTTTTAACTATATCGATAATTCTTCCCGGCCCGTCCATAGGAAGGTGAACGGAAAGTTGGGGTGTATTTGGTATGCAAACAGTACTGGACATTCAGAGTGAGGTAGGCAAGTAAAAGAGTTTTATACTGTTTTAGGGTTTTTAATTTGACATGGGTTGTTTATTATAGTGAATTAGAGATGCACAAAGTCTTGAGCTTT 2974 42.84 MQRHRNPANGYRSNPIGIGGGGGGIAAGGPGYRSYNRGGFGRGQPKVFQSGNSQPPPPRRVDVFMEAGKLATEYLVSKGILPPNSVNGKWQGSNLKSQIGGGDGVPDADSGTGGGRRRFPDDYGSATGSRDGVRARRTMGSFKNPGFEWNREISRSSSLSEKVKPSLDKQGDGDSVSGSVEEQRSAGKDGAIEDQKSVSGDLESRNSEAGNLETAIDNKPNELPEDNAGIKTPISDVESAEKSDSLKVPNASEVIIDDDKRESDKPIVKEEPAQEHSTDENNNTSANKTSSDLLTLIRFNKVPTRTRSSVTLKGSKSDSLLTSGDENKNKIQNSGEPATSLQDVTTADENQEPNHELKIEEVPIEEEAAQMDHKYNFGSRSQSFPQRSSVTDEELGEEQHGYNRSSSVVLGRGEKRPLHLSDSPESAKKPRDWTSGDGYLHLSNSREDQPSGITQPCNVYAEEKQLFPNSFKICDLNLMEVSDVNDNHDTNSVIGFSSIRQPKQEPGSVDFDLTMNSSCDITDRQTRRGADDKGVEVIDLDCDSGQDDKGFNNSERREEAIFTDLESFPDSMQRVSDLPQDGYGLMISELLEADIPNSTVPTGVNSMHNEMSLQNDEGILGDDESIYMSLGEIPISFVPVWDQQPSQGYDKRY 653
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00197 653 MobiDBLite consensus disorder prediction 349 373 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 415 435 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 81 454 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 253 277 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 1 64 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 186 201 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 375 390 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 84 98 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 278 348 - -
Cati3g00197 653 PANTHER PROTEIN, PUTATIVE-RELATED 2 652 IPR040276 -
Cati3g00197 653 MobiDBLite consensus disorder prediction 150 164 - -
Cati3g00197 653 MobiDBLite consensus disorder prediction 438 454 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00197 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:1558945 Cati3g00197 Cati-Chr3:1558945 tandem
Cati Cati-Chr3:1558945 Cati3g00198 Cati-Chr3:1558945 tandem