AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00199 GATAGGACAGCTTTGTAGAGTACCCAAAACACCTCTCCATCTCTCTCTCTTCTTTTTTTTCTTTCTTTCTAACTTTCTCTCTCACATAGTCACACACTAACATTGCATATTCATTGATGGAAGGTGAATCAGTGGTGTCAATGGTTCAAATTTTGCTTTTTGGTGGTGAGAAGAACCTGATGCTCTCTTTTTGATGTGTGAGTGAGTGGTGCTTCTTCTTCTTCTTCTTTCTTTCTTCTTCTAAGTTTTTTGATCTTCATCTTCTTTCTCTTTATATTCTCTTTCTCATTTTTCTCAACTACCCAGAAAGAAAAGCTCATGAGATGAGGTTTGTTTGATGCTTTTTTGTGTGATTTCTTTCTTGAAATTAGTTTGTTTAGAGGGTTTGAGTGTGTGTTTGTGTGTGAATCTTTGTGGGTTTCTTGAAAAATCCTTCTTTTTTCAATCTTTTTTTTTGTGGGTGTTTCCATTTTCAAGATTTATTTGTGTTTGTGTGTGAATCAATTGGTTCTCTTTGTGGGTTTCTTGAAATTTCTCCCCTTTTCTCAATTTTTTGTTATGGGTGTTTTCAAATTTCAACCTCAAGATTTCTTTATGATTTGTGTGTGAATCTTTGGGGGTTTCTTGAAAATTCTTCCTTTTTTTTCACCATCTTTTTCTTATGGGTGTTTTCCATCTTCAAGATCTCTTTATGATCTTGTTTGTGTTTGTGAGTGAATCAATTGGTTCTCTTTGTGGGTTTCTTGAAATTTCTTTATTTTTTTCAATCTTTTTTTTATGGGTGTTTTCATCTTCAAGATTTCTTAATGTTTGTGTGTGTTTGGGGGTTAGATTTGATGTACCAAAAACGACAAAAAAAAAAAAAAATTTGTAGTGTTTGAATGCTTCTTGGTATGAAAGATTGAAGCTTTTTTCTTTGTGATTTCATGATTTCTTCAACTTAATTCTTGAGTTCTTCTTCATCTTATGATTTTTTTTTTCAAATCATCAACATCTAGACCCAAATCTTGATGAACCAAATTGGTCTATTTTCTCTCTCTTTTTTCTCTCTGATTTTTATTTTCTCAAGATTTTTATGTGGTCATGCTCTACTGTTCACTATTTTAGACCCAAAGATCTGACTTAAATTTGGCCTTTATTTCTCTTCAATCTTCTTACTAACCACCTACACAATTACATCTAGACATAGGGATCTTGACTTAAATTTGTGCTTATTTTCCAAGTTTCCCCCAAGAAAAAGTTCAAATCTTTGAACCAAATCTTGGTTTTCATGCCTCAATTTCTCCTCTCTTTCTTCTGGGATGATGTTGATGTTAGTGGATGGTTTTGAAGCAAAGATGGGTTGGAGTTATCTGATGATGATGATGATCATCTCACACCAAGGATGCCTTTAAATCAAGATAAGTGGGGGCATTTTGTTTGAAATTCTAGAGAGAGAAAGAAGGATCTAGAGAGAGAAAGGGGAGAGTACTACTAGTGTGTTGTATATATGCTGAAGGCCAAGTGTAAAGGGACAGTTGTTGAGAAGAAGAGTTCTTGTGACTGTTTAAACAGCACAAGAAGACATAAGAATATTAGCAGCAGATGATATCCCTTGATGATCATCCACCACCAGATCCTTCATCATCCCATCATCATCATCATCAAATCTCTCATGATCATCATCATCATCATCTCAAGATCAACAGTGATGATCATAAAGCTTCTGTTTCTGTTTCTGATTTAGATCTCAAGTGTTCAGATGCTGATCTTGATAACCCACTTCCCAATTTCTCTATAAGGGATCATGTTTTCGGTTTAAGAAGCAAAGATGTCGCTCGTAATTGGCCGTTTTCTTCGAAAAGTTTGCAAATCTGCTTGAGAAATGGAGTGAAAAACTTGTTGCCACCTTTCCAGCCTCTTGATTCAAAAAGGGATACCAACTCATCTAGATGCGATCTTGAAACCCGTTTGGCCCGAAATGAAGAAATCGTGAACGGTTTTGATGGCAAACCCATGGAAGATCGGTCCGAACATGTTGTTTCTGATGCCGCCAAATCAATCCATGAGCCACCCGTGAGCGTAAATTCAAGTGGGTCGAAAGAAAATAAGGAATCCAACCCGAGACCGGTTACGAAAAAGGGTAGATCGGTCACGAAACCGAATTTTGGCATCGAATCGGCCGATCAAACTGACCCCGCTCCAAACAGCTTCATCGTTTCGGAAACCATGGCGTCAAAAGTTTGCCCGGTTTGCAAGATCTTCTCGTCATCTTCTAACACGACTCTAAACGCCCATATCGACCAGTGTCTAACGGGGGAGGCGAGCATGAAGTGGACCGATAACCCGAAGGTTATCGTAAAACATCGAATCAAGCCTCGGAAAACGAGATTGATGGTCGATATTTACGAAACCGCCCCACGTTGTACGATCGAGGAGCTCGACCGACGAAACGGTACGAGTTGGGCCACGAATTCGAGTTTTCCTGCTCAAGAATTCCGGTTTCAAGAAGAGAAAGAAGAGCCGGTATTGACGACGAATGTCACCCCGGAAGGTAACGATAACGAAGGGGATGTTTATATCGACACCGATGGGACCAAAGTTCGGATTTTGTCGGTGCCGATGAAAGCGGGATCGTCGGAAAATAACGGGGCTCGGAAGTTACCGAAAGGCGTGAAAGGGGGTAAAATCGTCACCGGGAAGAAGAAAAGCAATAAGAAGCGGTGAAAAAGAAGTTGTTTTGATGGCGGAAAGTTGCGAAAAAGAGGTAGGCGGCAGAGAGCCGATGAAATCTCCGGCGGGTTTGACCATCGTAAGACCGCCGTGGGCGTGCTCGAAGCGGACGCGTCTTGGGAAGAAGCTCACCGTCAAGCGGCAGAATCTGGGATTACAAAACGACCCCAGAAAAGAACTCGTTGAAAGTGAGAACCCGTTACAAACTTGGAAGAAAACGAGAACCCTTTCACCGTTAACGGACCCGGCGGGTTCCAATCTTTCGAGGAAAGCCGACACGTTTTCGGCCGACGATATCGCGGGTTCGCAAGATTCGTATCCATCCCGAAGCTCTGATTCGGATCCCAATATCGGAGTCAACCGCAAGTTCTCATCTAATGCGAAACGAAAATTTTCGACTTTCGAGAAATCCCAAGACCGTTGCTTATCGATTGAAAAGTCTGGGCCTTCCCAGGATTCGTCAAGAGATGAATCTAGATCGGAAGAACACACATCCGGAAAAAGTTCGAATGACGAATCTTCCGTTGGAATCGAAACCTCAATCGAGGATGAATTACGTGACGTAGATTCCGTTAGAAACGAGAATCTACCCGATGACGATCGAGATCGTGGTGTTCCAGCCACCAGAATGATCGATGAAAATGAGGGCTTAATGGATTTAGGCAATTCTTTCGATCCCGAATTCTCGAAACCGGTCGACGATCATCCAAACGGGAAAAACATATTCGGAAACGATATCGAAGATGGCACGGAGGATGTCGAAAAGAATCAAGATTACTTTCACGAGGTCGACCCGATCCCGATTCCGGGACCACCCGGATCTTTCTTGCCGAGCCCCGGTGGAGATACGGTCTCCGAAGAGATTCAACCGATTAGGGTTCCTCCAATTGAAAACCCGCATAATCTCGACACGGTCGATCGAGACTCGATGTCGAATTCTCCCGTTTCCACGGTATCGAACCCCAGCATGGCGAGATCGGATTCAAGATCTTCCGAGAAGTTATCTTACCGATCGAATTCCGTTCAAGATGATCTGAGACCGGGTATTTCGATCGAACCCGAGTTCAAAAAATCTTTAACGAACGGTGGCGATGATTGGAGGCCCGTCAATCGTCCCGAAAAGGGTCTGTCTCCCACCGGTTTCAAGACCGATCAGCCATGTTGCTGCTCGAGAAAAGAGACGGTATCATCGTATTCAGTTGCTTCGAGTTATCAAGATTCGTTTTCGTTAAGGAAACAACCGCTGATCGACCTGACCCGGAACCCGAATCCAAATGGGTTAACCAACTTCCGATCCGATTCGATGTTCTTGATTAACAACTACCCGATTTCACAACCGCCTGAAGCCCCGATTTTCCCGCTGTCCGCCAAGAATTCGACCACTGTTTGCGATTCTGCCGCCAGCCCTTCAAAACCCGTTCTGCGATTAATGGGAAAAAACCTAACCGTGGTCAAAACCGACGACGATTTTAGACCTCCCATGAGTCAACTCGTTCACCGTCCCGTAATCTTTAACGAGTTCATGGCGGTGGATCGGAATTCGGGCCCGATGGTGCCTCCGTCTCGGGCCCGTTACGGGTATAACGAAGTCGATCCTCGGTCGAATCCGAATCCGAATCCCGTTAAGGAAATCATCATCATCGATGATTCCTCCCCCGAAATCGAAGCTCGTGATGGCTCAATTCGGAATGAGTTCTTGAAAAGAAATCCGATGAATCCGTTTTACGGAATGTACCAATCGCAAAGTTCCGATCGTTTTCCGTACGGTGGCGGCAGAGGCGGTCCGGCGGTGTTTCGTGGCGGTGGGTTTCAAACTTCTTCCGGCATGATCATGCACATGGGATCATCATCATCATCATCATCATCATCATCTTCAAATCCGGCGTCTCATTTGCGATCATCAACGGCATACTATCCTCCGAGCTATCCATGATGTGGATCGATCGATGAATGATTACACAGATGAGTTTTTCGATCTCTTATTTCTCTTTAATTTCTAGATTATTAGAGTTTTAAGAACTTTGAGCTTCAAATAATAATAAATCTTGAGAATCTTTTTAACTATTAATTAAGTAATTTTCATTTTCAATGCTATTTTATGCTTAATTTTCTTGAAATCAAGAATCTGAAAAGACACCATTTTTAATCATCTTCTCGAATACCCACAAAAGTTAATCGATTTCTGGGTTCAAATCCTGTTTTGGGTTCTTTCAAAGATTGAATTTTGTTCAGAAAATCATGTAGTAAACCATGCATGCATGCATACATGATACATATCATGTATGTACATGATATGATGTGATGTGTCTTCTCTAATTGGTACGTTTTACGCAGTCGATACGTCTCGAGTACGGACCCGAAAACCCGAACTCGGAATACGAAATCTGTGTCGGTCGCTCGTTATTTTCTTGCAACTTGTCTCGTTAATTTCATTTCGTTACTGTTTGATCTGAATTTAAGACTTCTGAGTTGTTTCTTAAGATCGGTTGTTAGGTTATGATATGGATGATATTAACATGATATGATAAAAACAACGAAGG 5252 41.93 MISLDDHPPPDPSSSHHHHHQISHDHHHHHLKINSDDHKASVSVSDLDLKCSDADLDNPLPNFSIRDHVFGLRSKDVARNWPFSSKSLQICLRNGVKNLLPPFQPLDSKRDTNSSRCDLETRLARNEEIVNGFDGKPMEDRSEHVVSDAAKSIHEPPVSVNSSGSKENKESNPRPVTKKGRSVTKPNFGIESADQTDPAPNSFIVSETMASKVCPVCKIFSSSSNTTLNAHIDQCLTGEASMKWTDNPKVIVKHRIKPRKTRLMVDIYETAPRCTIEELDRRNGTSWATNSSFPAQEFRFQEEKEEPVLTTNVTPEGNDNEGDVYIDTDGTKVRILSVPMKAGSSENNGARKLPKGVKGGKIVTGKKKSNKKR 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00199 373 MobiDBLite consensus disorder prediction 339 373 - -
Cati3g00199 373 Gene3D Classic Zinc Finger 213 239 - -
Cati3g00199 373 PANTHER HAPLESS PROTEIN 1 371 - -
Cati3g00199 373 MobiDBLite consensus disorder prediction 101 120 - -
Cati3g00199 373 MobiDBLite consensus disorder prediction 1 39 - -
Cati3g00199 373 MobiDBLite consensus disorder prediction 130 199 - -
Cati3g00199 373 MobiDBLite consensus disorder prediction 156 170 - -
Cati3g00199 373 MobiDBLite consensus disorder prediction 130 150 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00199 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35477 Cati3g00199 Cati7g03613
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:1584484 Cati7g03612 Cati-Chr7:72961466 dispersed
Cati Cati-Chr3:1584484 Cati7g03611 Cati-Chr7:72961466 wgd