AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00205 ATGGGACTTCTATTCAGAAATCACAATGAAGATCAAAAGGGGTATTCACAATCATTGAAGAAAACAGAATTTGAAAAAAACGGAGAAATTAATGGTAAAATTAAGGATAACGGAAGGCACGACGGTGAAAACACCGACGAGAACGGATCTCCGTCGCCGTCGCCGCCGGCCGCCGCCACGAAAGGGCGGGGGTTGAGGAAGTGGCGGAGGATTCGGAGAGAATCCGGTAAGGAGACGAATAGTAGTTTAGATAGCAATCGAAAACGAGGCTCGATCGCGATTCCGATCGAGATGAAACAGAAGAGCGAAGGTTCGAGTTCTTCGACGAATGCCGTGTTTAATCGTAACGGTCCGATGTTAGCCGATTTGGGATCCGATTTTGCCACGAGAGCCGATTCGGAGAACAGCGAAGATCGGAACAGCCGATCGTCGACCGGAGCTAGCGTTCCGAGATCGAAGAATCCGGAGCCGGTGATCGGGAAGAATTCGGTAAAATTATCCGGTGATAATCAGCCGGGGAAGAGTCGAGGAGGGTTAACGAATAAGAAGGCTCGAGGGGTTAAGATAAAGAAGGAGAATTCGATTTCAAGCGTGGAGTCGGATTCCCGGAGCTCGAATTTTGTGTTTAATCGGGGTGTGAATGGTGGAGGGAGCTGTAGGTCGGGAAACTATGATGAGGATTATAGTGACGATGGTCGGAATGGTGGGGATAGGTGTTTAGATGAGGAGGGACGGAATGGGAATGATGGTGATTTTGAAGGGATTTCGCGTGATGGTTTTGGGGCGGAGAATTCTTGGGAGGTGAAGGAAGAAAAGGTCGATAAGGAAAAATCGGGGGATCGGGATGATTTTGTGGAATCGAAATTGAGGGATGTCGGTAAAGATGATCCCTTCTCCAACGACACCAAGATCTCCGAGCTTGAATCCATCTTGAATTATGAAACCATGAAATTCGAACATGAAGAAATCTTGAAGCAAAGAATTGCAGCCGAGATCGAATTTCTAGTCATTTTGGATACAATCCAGAACTTGAAGACGGGTTGCAAAGATCAAATCGATCTTACGCTACCACAAAAGAACGTATCGGTATCAGAACCAGAACCAGTACCGGTACTAGAAAAGGTGAAGGTTGAGGATGAAGGGGAAAGTGCACGAAAACTGCGAAAAACGGTATGGAGATATGGATTTTGGTTTGTAATTCAATTGGTGTTGTTTCTTGTAGTTGTGTATTTGTTGGTATTGCAGTTTTCATCTCAAAATATGGAGGTTTTGCCAACTTAA 1281 45.82 MGLLFRNHNEDQKGYSQSLKKTEFEKNGEINGKIKDNGRHDGENTDENGSPSPSPPAAATKGRGLRKWRRIRRESGKETNSSLDSNRKRGSIAIPIEMKQKSEGSSSSTNAVFNRNGPMLADLGSDFATRADSENSEDRNSRSSTGASVPRSKNPEPVIGKNSVKLSGDNQPGKSRGGLTNKKARGVKIKKENSISSVESDSRSSNFVFNRGVNGGGSCRSGNYDEDYSDDGRNGGDRCLDEEGRNGNDGDFEGISRDGFGAENSWEVKEEKVDKEKSGDRDDFVESKLRDVGKDDPFSNDTKISELESILNYETMKFEHEEILKQRIAAEIEFLVILDTIQNLKTGCKDQIDLTLPQKNVSVSEPEPVPVLEKVKVEDEGESARKLRKTVWRYGFWFVIQLVLFLVVVYLLVLQFSSQNMEVLPT 426
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00205 426 MobiDBLite consensus disorder prediction 13 46 - -
Cati3g00205 426 MobiDBLite consensus disorder prediction 263 282 - -
Cati3g00205 426 MobiDBLite consensus disorder prediction 224 252 - -
Cati3g00205 426 MobiDBLite consensus disorder prediction 1 282 - -
Cati3g00205 426 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 301 426 IPR044696 -
Cati3g00205 426 MobiDBLite consensus disorder prediction 198 212 - -
Cati3g00205 426 MobiDBLite consensus disorder prediction 100 115 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00205 K27869 WPP domain-interacting protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:1610548 Cati3g00205 Cati-Chr3:1610548 tandem