AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00211 TTATTAAGCTACTTTTGTAAACTGGTATCAATTATTAGCTACACAGATTTTTAGTGGCTGAATGGAATAAGTCGTCCACACCGCGTCAACACGACTGGCTTCCATGTCTGTTCTTCGCTGTCTTTTTTATTTCTTCTTAAAACAGCCAAAATTTCCCCCTTTCTTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTCTCTCTAGAGAATTCGAAGAAATCAATCGATTTCTCACCTGCAACTATGAGCACTCCGATCTCCATTTTCCTCCTCCTATGCTGCTGCATCTCCACCTGCTTCTCTTCTCCGGTCTCCATTTCAGATGGAGTTTTCAGCTCCGGAGCTTCGATTGGACGAAATCTTCTTCAGGCTAAGAAACCTTGCCCTGTAAACTTTGAGTTCATGAATTACACAATCATCACTAGCCGTTGCAAAGGACCACAATACCCTCCTAATCTATGTTGTCAAGCATTCAAAGACTTTGCTTGCCCTTATGCCGAGGACTTAAACGACTTATCGAACGAGTGTTCTTCCACAATGTTCAGCTACATCAATCTTTATGGGAACTACCCACCTGGGCTTTTTTCCAGCTTGTGTCGGGATGAAAAAATTGGGCTGATCTGTCCAGCTTTAGCACCAGGAGCAGGAAGGAACAGTGTAGGGGCTGATTCAAACAGCAGCCACAATATCCGCAATTCACCCCCATTGCTGATGTTAATTGCAGGGTTCCTAATCTTCTTCTCCCGCTGGTTTTAACGGCTGAAGCTCGCTGCTTTTTCTTGCCAATGCCTGTAAGTTTTATCTGTGTTTTTCGATGTTGTATCATCAGCATCACGTGTGTTAGATAGCTCCCAGATGAAATTCTTGTATAATTATTAGCGTTATCCTTTACCCATGAAGAAAAAAATATGATATTTTTTATGAGTTTTCGATGTTGTATCATCACCATATGTATTAGATAGCTCCCAATTGAAATTCTTATATAATTATTTGCATCTATCAAAAATATATCTTTACAGCATA 1042 40.69 MSVLRCLFYFFLKQPKFPPFFNLSLSLSLSLSLSLFFLSLENSKKSIDFSPATMSTPISIFLLLCCCISTCFSSPVSISDGVFSSGASIGRNLLQAKKPCPVNFEFMNYTIITSRCKGPQYPPNLCCQAFKDFACPYAEDLNDLSNECSSTMFSYINLYGNYPPGLFSSLCRDEKIGLICPALAPGAGRNSVGADSNSSHNIRNSPPLLMLIAGFLIFFSRWF 223
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00211 223 PANTHER GPI-ANCHORED PROTEIN LLG1-RELATED-RELATED 59 219 IPR039307 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00211 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr2:13109154 Cati3g00211 Cati-Chr3:1664549 dispersed
Cati Cati-Chr3:1664549 Cati4g00450 Cati-Chr4:6186201 dispersed