Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00216	TTTGATCTTGATCATCATCCATGGCAGTATTACAATCTTCACTTTTACCTCCCAAACTTTTTCAGTAATAAAAATCAAGATTTTCTTTCTTTCTTTCTTTCTTTCTACTCATCCATATACACACACTACTAGTGTGTAAAACATGATGTGTTGTTATTACTGTAGATTTGTGTGTTGGTGTACGATTGGACCTTCTCATCTCAATCACAATCTCAATCTCAAATCCCTTCATCAATAAATGCAAAAGCTCCACATCTTTCTTCTCCCCTTCTTCCACCGACGCTGAATAACCCCTTCTTCTTGATTCTTTCTTTTCTTTTCTCTTTGAAAGAAAAGAAAAGAGAAGAAGAAAGAGTCGGAGAACGTCGTCGTTTTGGTCGGCCGGTGACGTGATCTAAACCCACCATGTCTTCCGGCAGATACATGGCTTACTCGCCGTCGCCTTCCGCCCCTCACTCCCCTCACATCGCCGGTCTCCGGTCGGCGGCCACCGCCATCGTTGAGCAAGAAAAGTATCTTTCGGAATTACTATCGGAACGAAACAAACTTAGTCCATTTGTGCCTGTTCTTCCACAATGTTATCGGTTGCTGAATCAGGGTGAGTTTGTTAAGCTTTGGACACAATTGGTGTGGACGCCTGGAATTGGACCCTGGGCAGATCCCATCATTCCACCACATCCCCCTGAGCCTCGACGAATGTCAGCTTTATTGCAGCCTTCGTCTGCTCAGAGCTGGCTTGGTTCGCAGGGGAGTTCGTCGGGTCTTGTGGTGAAGAGAACGATAAGGGTCGATATCCCTGTGGCGAGTTATCCTAATTTTAATTTTGTTGGGCGGCTTCTTGGGCCGAGAGGGAATTCTCTTAAGCGAGTGGAAGCGAGTACGGATTGTCGTGTTTTAATTAGAGGGCGTGGAAGCATCAAGGATCCGGCAAAGCGGGTGGTGTCATACACTGATCCCGAACTGACCAAGCCCGGGCCTAGTGAGCCTGAAGCCTGGTCTGAAGAGATGATGCGAGGAAAACCAGGGTTTGAACACCTGAACGAACCTCTACACATACTCGTGGAAGCAGAATTACCTGTTGATATAATCGACGCCCGTTTGATGCAAGCTCGCGAAATTCTTGAAGATCTCCTTAGACCCGTGGACGAGACTCATGATTTCTATAAGAAGCAACAACTACGAGAGCTCGCGATGCTTAACGGCACCCTCCGTGAGGAAGGGTCTCAGATGTCGGGTTCGTTGTCGCCCTTCGACAATAGCCTTGGGATGAAGAGAGCGAAGACCAGAGGATGATGGGAAACGAAGCCCGTTTACTTCACTAGTGGGCTTTTGGAGCTCGCATATTTTGGTATATGCGTTGCGACACAAACGCTGCCTCCAACCGCCGTCGGGGCACCGGATACTATTTGCATCCCGTTCTAAAGTGTTACTATATGATATGAGGTGTGTGTTTTGGGGGAAAAAGATTGTTCTTTTGAGAGTAATATTGTAGTAAAAAAAAGACCTTAATTGAGAGTAATATGTTATAGATTGTGTGTGTGTGTGTGTGTTTGAGAGCTTGTTATGGGAGTTTTGGTACAATTGAGAGTTGAGTATTTTATATGATATAAATTGGTTTGTAGTTTTGTAATCGTTGAACCAACTTAAAACCATGATAGAAGTTGTCGATAATCTGAAACTCTAAACTTGCTAGAAGTAGTAGTATACTTGTTCAAGGCATTGCGATACATCTCGAGTATGAAGTCAAGGGCTCGTAAATCTCGATCATGAATTGAGAACTCGACACCTTTAATCATATTTATTGATTCTATTTTATCGGCTTTACGAAGTACTTGACTTATTAGTAGGGATAAATGTTTATCCTGTATTTGAATATATTTATCGGTTGGGTTGTACATGTTCA	1903	43.83	MSSGRYMAYSPSPSAPHSPHIAGLRSAATAIVEQEKYLSELLSERNKLSPFVPVLPQCYRLLNQGEFVKLWTQLVWTPGIGPWADPIIPPHPPEPRRMSALLQPSSAQSWLGSQGSSSGLVVKRTIRVDIPVASYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAKRVVSYTDPELTKPGPSEPEAWSEEMMRGKPGFEHLNEPLHILVEAELPVDIIDARLMQAREILEDLLRPVDETHDFYKKQQLRELAMLNGTLREEGSQMSGSLSPFDNSLGMKRAKTRG	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00216	295	MobiDBLite	consensus disorder prediction	270	295	-	-
	Cati3g00216	295	SMART	kh-6	122	237	IPR004087	GO:0003676(InterPro)
	Cati3g00216	295	Gene3D	K Homology domain, type 1	29	275	IPR036612	GO:0003723(InterPro)
	Cati3g00216	295	PANTHER	RNA-BINDING PROTEIN RELATED	15	271	IPR045071	GO:0003729(PANTHER)\|GO:0005634(PANTHER)\|GO:0048024(PANTHER)
	Cati3g00216	295	MobiDBLite	consensus disorder prediction	1	21	-	-
	Cati3g00216	295	SUPERFAMILY	Eukaryotic type KH-domain (KH-domain type I)	128	269	IPR036612	GO:0003723(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00216	K14945	protein quaking

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:1716025	Cati9g03638	Cati-Chr9:79060037	dispersed
	Cati	Cati-Chr3:1716025	Cati12g01029	Cati-Chr12:47095394	transposed