AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00236 ATGTCGATTTTCGCGGGAAAATTCATTCATGGCGCTGCATTCGAGCTTCAATTTAGCAGGGCGAAGAAGATTGTAATTCGATGCTGTTCGAATATTGGGGAAAGATCTAAGGGTTTTCCAGTTAGGTACACTCCTAAGAGATCTTCGAAGCTCAATAAACCCGATGATGATTCTATTCCGTCGATAAAGGAACCTGAGAATCATGAAGTGCATAGATTCACAAATCCGGATCCTTTTGAAATTCCGAATGGTGGTAAGAGGTCGATGATAGGATTGATTTCGGACGAAAGGTCACCGGATGACGATTTTAAGTCAGGCAAGTTAAATTCGAAGGAAAAGGGAATTCTTAATTCAGATGTGAGATCAGAGGTGGGAGAACATGATTGTAAATGGAGATTTCCGGAGTCAAATCCTATTGAAGAACTTGATGAGTTTGATGCCATGGAAGGTCCTGAGGAGGTTTTGGATGAACTCGGCGTAAACAATGGAAGTTACGAAATCAAAGATCCAGAACCCGAACCTGGTAAAACTAAAGAAGCAGCTGAGAAGACAACGATTCGGTTGCTTGCTGCAAGAGCATACACAGCACTGGAGCTCAAGAAAAAACTGCTAGGAAAGAAGTTCTCCCATGAAGTTGTCAATGCGGTGATTTCTGATTTCCAGAACAGAGGTTTTATCAATGATTTCTCGTATGCTGAAGCATTTTCTCGATCAAGATGGTCTTCATCAAGTTGGGGTCCACGTAGAATCCAACAAGATGGTGAACCCAGTGATGATCAAGATTCTAGACTTGGATTATCGAAGGCCTCGCTGGATCATCTATTTGCCCAAGCTTCAAAGCAGTGGCTTCGTGCTAAAGATCTCCCCGTTGAAAAACAAAAGTCGAGGATGATCACGTGGCTTCAATACCGTGGCTTTAGTTGGGGAGTTATCAGCTTTATTTTGAAAAAGTTACAATCTCGGCATCCTCCGTAA 975 42.46 MSIFAGKFIHGAAFELQFSRAKKIVIRCCSNIGERSKGFPVRYTPKRSSKLNKPDDDSIPSIKEPENHEVHRFTNPDPFEIPNGGKRSMIGLISDERSPDDDFKSGKLNSKEKGILNSDVRSEVGEHDCKWRFPESNPIEELDEFDAMEGPEEVLDELGVNNGSYEIKDPEPEPGKTKEAAEKTTIRLLAARAYTALELKKKLLGKKFSHEVVNAVISDFQNRGFINDFSYAEAFSRSRWSSSSWGPRRIQQDGEPSDDQDSRLGLSKASLDHLFAQASKQWLRAKDLPVEKQKSRMITWLQYRGFSWGVISFILKKLQSRHPP 324
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00236 324 MobiDBLite consensus disorder prediction 241 263 - -
Cati3g00236 324 MobiDBLite consensus disorder prediction 48 75 - -
Cati3g00236 324 Gene3D - 268 323 IPR036388 -
Cati3g00236 324 Gene3D - 181 225 IPR036388 -
Cati3g00236 324 Hamap Regulatory protein RecX [recX]. 150 322 IPR003783 GO:0006282(InterPro)
Cati3g00236 324 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 15 323 IPR003783 GO:0006282(InterPro)
Cati3g00236 324 Pfam RecX, second three-helix domain 227 253 IPR053924 -
Cati3g00236 324 Pfam RecX, third three-helix domain 271 314 IPR053925 -
Cati3g00236 324 Pfam RecX, first three-helix domain 186 218 IPR053926 -
Cati3g00236 324 Gene3D - 227 253 IPR036388 -
Cati3g00236 324 MobiDBLite consensus disorder prediction 43 83 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00236 K03565 regulatory protein