AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00241 TCAACGATTGCCAAACCGACATATTTCATTTTGCACCATATCATAAGAGCCTCTTAATCATCCTGATAACTTAATCATCCAGCATCAAACCATTCAGCAACTGCTAAACGTTTTGAGATACCTTAAAGGTGGATTAAAAATAGAATGAGCAGTTCACGTTTTTGCACATGTAGTATCCTCCTCTGTCTGAATGGTGTGTCTGTCTGTATAAAGTCAGAGAGAGACTTTGTGGACAGAAAAAGGTATGAATAATATCTTTTCAGCTCTCCTCTTGTCCAAATCCATCACAGATTTCCACTTTGGAACTTATAAAAATGGAGCTGGTCCCATATTCTGATCCTAATAATACCACCACCACCACCACCTCCTCCTCCGCCGCCGCCTCACCGCCGTGGCAAGAGATGTTCCGGTCAGCCTCCACCCACAAACCAGATCCACCTCCGCCGCCGCCACCACCGACCCCACCACCGCAATCCACCACCAATCCAGTTCAAGATCATGATACCTCCGGCGACTCTCAGGTACGTCTCGCGCTATACATAGCCATGGCACACGCGGGATTAGCCTTCGTGATCTTAATCCTCTACGGCGTCTCTAAACTACTTGAAGAATATCTCCGCCCAATTCTCTGGGCGGTTCTTTGTTCGATTCCCCTTCGAGGAATCCAACAAACTCTCGTCTCCTTTTGGTCCGAGCCTTTGAAACAAGGTCTTACGGAAACCGTACTAGCTATACCCGTATCTGTATATAGTGTTTTCATCGGGACGCTTGTCGAAATCAGAGACTTTTTGTATAAACTAATCGGCCGCAAAAAGAACTCGGGTATCAGAAGACGAAAACGAAGTGGGTTTTCGATTTTATTAAGATGGTTGGTGTCTTTTTGGGTTTTTGTGATGGCTTATGAACAATTTGATGTCCTTGGTGCCATCACTTTGTTGGGATTAGGGTTTATGTTTGCATCCACCAACGTCGAATCTGCGGTTTCGTCGTTTCGAGATCGTAGTTTCGGGAAAAACCGTCACACGGCGTTCCTAACGAAGTGGATTTCGAACCGGTTGGAAACGATTGTGGCGATTGGGTTGATTTTCGGTATGATTTTCGGGTCTTTGGCCGGGACTATGTTTTTCTCTTACAAGATCGGAGTCGAAGGGAAAGACGTCGTGTATTCGATAAAATCTCATGTCGAAGAGAACAATTACACGGAGAGGATCGGGTTGAAACGATGGATGGACGACAACGACGTGCCGGGAATGGTGGATCGATATACGACTCAATTTTACGAAACGGTATACGAACAGGTCGATAGTTTAGCGATTCAGTATAATATGACCGAAATCGTTCAAGAAATGAAACAAATTATCGCACCACGACCGGTTAACTCATCCGCACCATCTACGGCATTGGTTGCGCGAAACCCGTATGCGGAGAAGATCCTACGGTTGAAGAAAATGGTCACTAATCGCGAATGGGCGGAAATTTATCCCGAAGTTAACGGGATGTTTAAAGAGGCACGCGTTAGCAGAGAGGATATGATCGAGAAAGCGAAAGCGATCGCTTTTCAAGGAAAAGACGTGGTCCAACGGGTGCTCGCGAGTAGTAAATCGATCGTGGGTGGAAGCACGAAGCTCGTTTTTGTGGTTATCGAGTCGATTGTTTCCGGGGCGGCTGGGATTTTCAATTTCGTTTCGCAATCGATGGTTTTCATATGGGTTTTGTACTCTCTGATAACGTCGAAGTCGGGTGGGGTTACGGAACAGGTTATGTGTATGCTTCCGATCTCGAGATCGGCCCGGACTCGGTGTGTCGAGGTTATCGACAAGGCGATTTCCGGGGTTCTTTTGGCAACGGCCGAGATCGCTGTCTTTCAAGGGTGTCTCACTTGGCTTTTGTTTAGGCTTTTCGACATTCATTTCTTGTATATGTCGACGCTTCTCGCGTTTATCAACCCTTTGCTGCCGATATTTCCGTATTTCTTCTCGACGATCCCGGCCGCGTTGCAACTGGTGCTCGAAGGGCGGTTTGTGGTGGCCATTTGTTTGTCGATTATTCATCTTTTGCTTATGGACTATGGTACTACCGAGATTCAAGAGGCCGTACCTGGCTACAATGCTTATCTAACCGGGCTTAGCATCATCGGTGGAGTGGCGTTGTTCCCATCTGCAGTAGAGGGAGCGATAATGGGGCCGTTGATTACAACGGTCGTTATTGCTCTTAAGGATTTGTATGTAGAATACGTTTTGGACGAACCGAAAGAAAGCGAAAAGGAGTAAGGGAAAGCTTGGCCTTTTTATGCCATATTTGCTTGAGAATCCATGTATTCGGGGCCTCTAGTGAGTTACAGACGGAGTTCGAAAAGGTCAAATCTTTGATCATTCCGTCATCTATGATCGAGTTGCGAAAACTTCTGTACAGGTATCCTACATCTGAACAGAATTCTTTAAAGAATATCTGTATAAAGTTCATGCATATTAGCAGGCTGCAATGTGTATTGCACCTTATTTTTTGTAATATTTTGTATTCTTTGGAAGCTTGTATTGTTTGAAGCAACTAAGTGTTGATATTTATGTTTATAAGAAGAATCTGTTGTTGTCTTTTTACCATTCTACCCAAGGCAGGTAAT 2620 45.11 MELVPYSDPNNTTTTTTSSSAAASPPWQEMFRSASTHKPDPPPPPPPPTPPPQSTTNPVQDHDTSGDSQVRLALYIAMAHAGLAFVILILYGVSKLLEEYLRPILWAVLCSIPLRGIQQTLVSFWSEPLKQGLTETVLAIPVSVYSVFIGTLVEIRDFLYKLIGRKKNSGIRRRKRSGFSILLRWLVSFWVFVMAYEQFDVLGAITLLGLGFMFASTNVESAVSSFRDRSFGKNRHTAFLTKWISNRLETIVAIGLIFGMIFGSLAGTMFFSYKIGVEGKDVVYSIKSHVEENNYTERIGLKRWMDDNDVPGMVDRYTTQFYETVYEQVDSLAIQYNMTEIVQEMKQIIAPRPVNSSAPSTALVARNPYAEKILRLKKMVTNREWAEIYPEVNGMFKEARVSREDMIEKAKAIAFQGKDVVQRVLASSKSIVGGSTKLVFVVIESIVSGAAGIFNFVSQSMVFIWVLYSLITSKSGGVTEQVMCMLPISRSARTRCVEVIDKAISGVLLATAEIAVFQGCLTWLLFRLFDIHFLYMSTLLAFINPLLPIFPYFFSTIPAALQLVLEGRFVVAICLSIIHLLLMDYGTTEIQEAVPGYNAYLTGLSIIGGVALFPSAVEGAIMGPLITTVVIALKDLYVEYVLDEPKESEKE 651
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00241 651 MobiDBLite consensus disorder prediction 1 65 - -
Cati3g00241 651 PANTHER TRANSMEMBRANE PROTEIN 30 648 IPR002549 -
Cati3g00241 651 MobiDBLite consensus disorder prediction 37 55 - -
Cati3g00241 651 MobiDBLite consensus disorder prediction 1 31 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00241 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35489 Cati3g00241 Cati7g03539
35490 Cati3g00241 Cati9g02119
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:1911703 Cati7g03539 Cati-Chr7:72513183 wgd
Cati Cati-Chr3:1911703 Cati9g02119 Cati-Chr9:23500878 wgd