AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00262 CCTTATCCCACCTATATTAACCCCAACTACTCCCATCCTCTCATTTCCACCATCCAATCCAAATCTCCTTCAACCAAATCACCCTCTCATCCTCCATTGTTGTTACCCATCAACAATTTCCTTCTAATCACACAGTTTTTCTCCTTGCCTTTGCTACAGAGAATTCGAGGAAGAAGAAGAAGAAGAAGAAAGAAAGAAAGCAAGATTTTAGGGTTGGGGTAAAACCCTGGAACGACAAGTTGCAGACATCACGGCTATACACGGCGGAGCAACGCGTCCCCTCGTACATGTCCGATCAGTACGCCGGAAGGGCTCCATAACCATCGAGAGCAACCCTTCCACGCACGGCGGACGTGGCGCCTTGCCGTCCGAAGGCGGTAGTCCTTCCGACCTCCTCTTTCTCGCCGGCGGCGGTTCCTCCTCCTCCTTTCTCCTCCTCGTAGATTAGGTTAGGGTTAGGGTTAGCGTGTATATATCTCTATCTATCTATCTATCATCATCATCATCATCGTCATCATCATCATCGTCGTGTAAAATTGTCGAGATTTGCTTTCGTTGATCGCTGTTTTCTACCTATTAATCAATCAATCAATCAATTAATTAATCGAAGAAGGAGATGTTGAGGATTAAGAGAGTTCCTACTATTACTTCCATCTACCAGAAAGAGGAGGCCGAGGACGGCGGCGCTACCCGCGGTTGTGGCCGGAATTGTTTGAGAAATTGTTGCATAACAGGGGCTAAGCTACCTCTGTATGCTTTTCCAAAATCCAACAAGGTTGATTCATGCGACAAAAACGAGTTCCCTTTTGCCTTCTTGGAGTCCCTTCTTCTAGGAGAGGTGATTCCAGGTGAACATGGCTTTGTTGCTCAGCTGAACGAGGGTCGTCACCTGAAGAAACGTCCCACTGAGTTCCAAGTTGATAAGGTGCTGCAGCCCTTTGATGAGAACAAGTTCAACTTCACCAAAGTTGGGCAGGAGGAGGTGCTCTTCCAGTTTGAAGCAAGTGAAGACAATGAAGTCAAGTTCCATCCAAATGCCGCTATTGATCTTGGCAAATCCCCAAGTGTCGTTGCCATTAATGTTAGTCCAATTGAATATGGGCATGTGCTTCTGATCCCTCGGATTCTTGAACGCTTACCCCAAAGGATTGACCATGAAAGCTTATTGCTTGCACTGTACATGGCACGTGAGGCTGCAAGTCCACACTTTCGTCTCGGTTACAATAGCTTGGGTGCATTTGCTACTATCAATCATCTTCACTTTCAGGCTTACTACTTGGCTGTGCCATTTCCGATCGAGAAAGCTCCCACTAGAAAGATCAGTGAGTTCAACGGTGGGGTTCTGATTTCCGAGATCTTCAACTATCCTGTTAGAGGTCTCGTGTTTGAGGGTGGAAATTCTCTTGAAGATTTATCCAATGTTGTGGCTGACTCCTGCATATGCCTTCAAAACAACAATATACCTTTCAATGTGCTGATTTCAGATTCCGGGCGATGCATCTTTGTCCTTCCGCAGTGTTATGCGGAAAAACAGGCTCTTGGAGAGGTGAGCCATGAAGTTCTCGACACTCAGGTGAATCCGGCCGTGTGGGAGATCAGCGGGCATATGGTGTTGAAACGGAAGGAGGATTACGAGTGGGCATCGGAGGAAAAAGCATGGAGGCTTCTTGCCGAGGTTTCTTTGTCCGAAGAACGGTTTCAGGAAGTGATCATGATCGTATTTGACGCCATTTCTGGTGGCGTGAACGAGAAGAAGTTGGTGGCTGATGACGAGCACGATATCGACCAAGTTGGTGGTGTGAAAAATGGGCCCGATGCAGATGCAGCCATGGTTACTGGGAAGCAAGAATGCCTGGTTCAATTCTAGGTTGGTTTGGTTGCTGTTATTTTATGTATATCTTGGGGTTTGGGTGTGCTGAATAAAGCAACATGGATTGCTGTTGTGTGTGCAAAACTGCTGTGTGGTTTGATTTGTATAGAGGTTTCAGTGTGTGCTGGCTGCTTTATGAGCTAGCTAGCTAATGGATGTTAATGAAATTATGTAAGTGGATTTGAAATTGGTGTTTGTGAGAAGTTATGATGTTCTAAGGTGTTGTTTGCTGAATGATTGTCTGGGTAAGTGTATGGCAAGGACTAGGAATCTTACTCGGTAAGAACGGAATTCTTACCGATACAATCATCTAGGGTTTGTTTGTTAGCGGCTTGATGAGCTTAAAGGGAGTTATACTTACAACTTATCAGTCAGATATACATGATTGTCTGGCAGTGGCTTAATGATATAGAAAGGGGCTTATT 2295 45.58 MLRIKRVPTITSIYQKEEAEDGGATRGCGRNCLRNCCITGAKLPLYAFPKSNKVDSCDKNEFPFAFLESLLLGEVIPGEHGFVAQLNEGRHLKKRPTEFQVDKVLQPFDENKFNFTKVGQEEVLFQFEASEDNEVKFHPNAAIDLGKSPSVVAINVSPIEYGHVLLIPRILERLPQRIDHESLLLALYMAREAASPHFRLGYNSLGAFATINHLHFQAYYLAVPFPIEKAPTRKISEFNGGVLISEIFNYPVRGLVFEGGNSLEDLSNVVADSCICLQNNNIPFNVLISDSGRCIFVLPQCYAEKQALGEVSHEVLDTQVNPAVWEISGHMVLKRKEDYEWASEEKAWRLLAEVSLSEERFQEVIMIVFDAISGGVNEKKLVADDEHDIDQVGGVKNGPDADAAMVTGKQECLVQF 416
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00262 416 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 75 373 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(InterPro)|GO:0080048(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00262 K14190 GDP-L-galactose phosphorylase [EC:2.7.7.69]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:2136708 Cati9g02031 Cati-Chr9:21869071 dispersed
Cati Cati-Chr3:2136708 Cati3g00262 Cati-Chr3:2136708 tandem