AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00266 CAACGAACCATCAAACAGACCTCGGCCACCCCACCACCCACCCACCCACCGCCATGGCTGCCGCCCAAACCCATCCTCTCATAGCAAAAGGCATCGACATTCATCGCACAGTCTCCCGCATCAACGACGAGCTCCACAGCTTCCGATCCTGGCTCCGGTTGATGTGCGTCGATCAATCCACCGCCTTCACCTTCTGCGTCTCGTGGCTGGTTTTCATCGTCTTCGCCATCGTCATCCCTCTCCTCTCCCATTTCTACCTCGCCTGCAGCGACTGCGACAACCGCCACGCCAGGCCTTACGACACGCTCGTCCAGCTCTCCCTCACCTCCATCGCCACGCTCTCCTTCGTCTGCCTCTCGCAATTCATCAGGATTTATGGACTGCGGAGGTTTCTGTTCTTCGATAAGCTCTGTAACGAGAGCGAGACCGTCCGTAGAGGATACACTCAACAGGTCAATAGCTCGCTTAAAATGGTCTTCATATTTGTGGCACCATGTTTTGCTGCTGAAGCTGCATATAAGATCTGGTGGTACACTTCGGGTGCTACTCGCATACCATTTTTGGGTAATGTTTATGTGAGTGATGCAGTAGCCTGCATCTTGGAGCTCTGCTCCTGGCTGTATAGAACCGTGGTGTTCTTCTTGGTTTGTGTCCTGTTCCGCCTTATCTGCCATCTCCAAATTTTGCGGCTCCAAGATTTCGCTCAGGTGTTCCATATTGACTCTGATGTCGAATATGTATTGAAGGAGCATCTCAGGATCAGGAGGCATCTACGCATCATAAGTCACAGATACCGTGATTTTATACTTTGGGCTCTCATCATTGTGACAGTGAGTCAATTTACAGCGCTTCTTAACACTACCCGCCCGAAGGCAGCTCTCAGCCTTGTTTCTGTAAGCTTATTGGCTGGGCTCATGATACTACTGAGGAGTGCCACCAGGATCACCCATAAGGCCCAAGGCGTAACATGCCTAGCGACTAAATGGCATGTGTGTGCAACCATCGAGTCATTTGATCCACCAGATGGGGACACCGAAACCCCACCTGTGGGTGGTACGGGAAACCATGTTTTCGGTGGCGATGGATCATCGGACAACGAGGATATTGGTAGTGAAGAAGACGATCTGGACAACACTAAACTGATACCCGCGTATGCTTATATAACGTATTTTGAGAACAATAGCGCGGGGATAACAGTGTACGGGTTTATGCTGGATAGGACTTCGATACACACGATAGTGATGATAGAGATGTCGTTGGTGTTGTGGTTGCTCGGAAAGACTATGTAA 1289 50.58 MAAAQTHPLIAKGIDIHRTVSRINDELHSFRSWLRLMCVDQSTAFTFCVSWLVFIVFAIVIPLLSHFYLACSDCDNRHARPYDTLVQLSLTSIATLSFVCLSQFIRIYGLRRFLFFDKLCNESETVRRGYTQQVNSSLKMVFIFVAPCFAAEAAYKIWWYTSGATRIPFLGNVYVSDAVACILELCSWLYRTVVFFLVCVLFRLICHLQILRLQDFAQVFHIDSDVEYVLKEHLRIRRHLRIISHRYRDFILWALIIVTVSQFTALLNTTRPKAALSLVSVSLLAGLMILLRSATRITHKAQGVTCLATKWHVCATIESFDPPDGDTETPPVGGTGNHVFGGDGSSDNEDIGSEEDDLDNTKLIPAYAYITYFENNSAGITVYGFMLDRTSIHTIVMIEMSLVLWLLGKTM 411
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00266 411 Pfam Protein of unknown function (DUF3537) 25 398 IPR021924 -
Cati3g00266 411 MobiDBLite consensus disorder prediction 322 356 - -
Cati3g00266 411 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 15 411 IPR021924 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00266 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35498 Cati3g00266 Cati7g03426
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:2170652 Cati4g03329 Cati-Chr4:91842121 dispersed
Cati Cati-Chr3:2170652 Cati7g03426 Cati-Chr7:71575946 wgd