AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00286 CAATCTTGCAAACCAAACACGGGATTCGAATAGAACTGAACTCCAAATTCCCTCCGAATCCAATATAATCTGACCTTAATAAATTTGTATTAATTGAATGTAGTAGTAAATAGATTTAAGAAGGCTATGCAGGAGTCCAAGAACATTCCGGAAGCACAGCCCTTGACCACCCAAGCTTCGCACGATTCGCAAGGTGACCAACGTAATAATAATAATAATAATGCAACAGAGGCTCCTGTTCCTGACTCCGGTTCAGCCTCCATTTCGAGCAGTGATAACAGAAAAGTTTCTCGGGAGGATATCGAACTTGTCCAGAACTTGATAGAACGATGTTTGCAGCTGTACATGAATAGAGAGGAGGTGGTTAAAACGCTACTAAATCGTGCGAGGATTGATCCTGGTTTCACGACTTTAGTATGGCAGAAATTGGAAGAAGAGAATGCGGACTTTTTCAGAGCGTACTACATACGGCTGAAACTGAAAAAGCAGATCATCATGTTCAATCATTTACTTGAACATCAATACCATCTTATGAATGCAGTTAACAACTTACCAATGGGATACCCCGTTCTACCACAACCTTCGATGCCAACTACCGGCCAACCTCATATGAATGCCATGGGTATATCTAGTTGTCATGTGGTCAACGGAGTGCCTGCTCCAAGCAACTTCCACCCGATGCGGATGAACTCCGGAAATGATCCTACCTCGGTCGCATCCAGTGGCCATTTCCCGTTTACCGCGTCGGAAATATCAGGGATGGGAGTAGACACATCAGCACTCGACACAGCTTTTACATCTGACGTGGCAAGCTCCGTAGGATTGCATCTGCCACCCGATAACACAACTTCTCGACCCTTTGATATATTACTAGATTCCCCTGAGCAAGAGGACATCGTGGAAGAGTTCTTTGCCGACTCTGTTCCCGGACCACCGTGCTCGAACTCAGATGAAGAGAAATCCTAGCTTAAGGTTCGTAAACCTCATCTTTTTCGATTTGGGATAGTAACACGATGATGTACAAATAAAAGGTAACAATACTACCCGGTTATTTTTATCTTGTGAGAGAACGTAGTTGGAAAACGTCTGTTATGGCACTAGAAATAGGCGATGCTACGTTAATTTCATTTGTTGTAGGTGGGCTATGAACGATCATTTCATAAGCTCAATAACACTACGGCTGAATCTTGTTATCCTAGTTGCAACCTAATATTCAGTATACTTTAGCAAAGTGTTACTTTACGAATATTAATTCATAAAATGTAGATTTCGCAAGTTGCTAAAGTGCTATCTG 1294 42.35 MQESKNIPEAQPLTTQASHDSQGDQRNNNNNNATEAPVPDSGSASISSSDNRKVSREDIELVQNLIERCLQLYMNREEVVKTLLNRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQIIMFNHLLEHQYHLMNAVNNLPMGYPVLPQPSMPTTGQPHMNAMGISSCHVVNGVPAPSNFHPMRMNSGNDPTSVASSGHFPFTASEISGMGVDTSALDTAFTSDVASSVGLHLPPDNTTSRPFDILLDSPEQEDIVEEFFADSVPGPPCSNSDEEKS 279
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00286 279 PANTHER OS02G0137100 PROTEIN 55 240 IPR006476 -
Cati3g00286 279 MobiDBLite consensus disorder prediction 1 50 - -
Cati3g00286 279 NCBIfam TIGR01589 domain 59 115 IPR006476 -
Cati3g00286 279 MobiDBLite consensus disorder prediction 1 53 - -
Cati3g00286 279 Pfam Plant protein 1589 of unknown function (A-thal-3526) 62 113 IPR006476 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00286 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35510 Cati3g00286 Cati9g02061
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:2348320 Cati9g02061 Cati-Chr9:22206472 dispersed
Cati Cati-Chr3:2347025 Cati3g00286 Cati-Chr3:2348320 tandem