Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00295 | ACAAATTCTATTACATTTCAAGCCTTTGAAAGAGGGTATAAATGTCATTTTTCACAAATTCCCACTTGAGGAATAAAATTCAACTTGCCTTCAAGAAAGAGCAAAAAAAAAAGGGGGTTGATGTTGTGTGGAACGACGGAGACGATGATGAAGAAGAAACAACACCACCCTAATCTCATCTTTTTCAAGAACCCACTTCACTAACCCACCAATCTTCCAAAACCCTAATCCAAATCTTTCACTTTCTTGTGATTTCTTTCATCATTTTCATCATCTCCAAGAAAAACCCACATGGAATTTGCAGCAATTGAAGCTTCAATTTGGAACACTTCATCATACAAACCACCCCCTAAACTCTCCCTTTTCAAATCATCCCCAAAAGGGTGCCCAAAAATCTTACATTGTTCAAGATTTTCAAGATTCAAGAAAAGGGTTGTTGTTCTTGAATCAAGATTCTCGATAAATAGTTGTTATAGAGTTGTTCGAGAGGATAGAGGGTTAAGATCCATTTGGGTTAAAAGTGGTAATGTGGAAAGCCACTCAAAACCCCCAAATTTGGGGTTTGAAATTTGGGTCAAGAAAAGATTGGTTTTGATGGCTGTTTGTTGTGGGGTTTTAGGGTTTGGATGCAAAAGGGTTCTTGCTGCTGAAGGTGTTTTGAATGGTGGTGGGTATGTGGGTTTAGACCAGATTAAGTTGTCATTGATGAACTCTTTGCCAAAAGTTTTGATGGTTCTTAAGGTGTTAAAGGAACAAGGTTTGATTCTGGCTGCCCTTTTTGGTCTTTCTGCATTTTTCTCCATGGCTGAAACTTCAATCACCACTCTTTGGCCTTGGAAGATACGAGAGTTGGCTGAGAAAGAGTCTGAGAACGGTGTTTTCAAAATGCTACGCAATGATGTTACTCGGTTTTTAACAACCATTCTTATTGGCACAACTGTTGTCAATATTGGAGCAACGGCATTAGTCACAGAAGCAGCAACCGCGATATTCGGTGAAGCAGGTGTTAGTGCAGCCACAGGAGTAATGACGGTTGCGGTTTTGCTACTCACTGAAATAACTCCAAAAAGTATAGCCGTTCATAATGCCACGGAGGTTGCAAGATTTGTGAGTTGTAACGTATCTCTCAATGGGAATGCTGAAATTGCTTGGTCTGAAAGGAAGAAGGATATGATTGAAAATGTTTTAGAAATAAAAGACACGTACGTTCGAGAGGTTATGACGCCTTTGGTTGACGTTGTAGCCAGTGATTCTAGTGCAACACTCGTCGATTTCCACACCCTGTGGGGAGACCTACTAGAAAGTTCCACGGTGGGGGATATGGCTCATAAACCTGCTTACTTTGTTCCTGATTCAATGTCGGTTTGGAATCTTCTTAGAGAATTTCGCATCCGGAAGGTACACATGGCGGTTGTTCTGAATGAATATGGCGGGACCGTTGGAATTGTAACGTTGGAAGATGTGGTTGAAGAAATTGTTGGTGAAATTTTTGATGAAAATGATTCGAAAGAGGAAATCGAGAAAAAGACCGGGTATATTGTGATGCGGGCTGAAGGAATTTATGATGGGCATCAATACGAAACGGTATCAGGGTTTGTGTGCGAGGCGTTTGGATACATCCCGAAAACTGGCGAAAGTATAAGAGTGGTACTAGAGAAGGAAGAAGAGCATGAAGAGTATACGGAGGACCAGGGCGATCGGCAACATCAAAACCAGAAAGAAAAGAACCAAATATTTCAAATAGAGATTTTGGCGGGCAATGCAAGAAAGGTTGGTGCAGTGAGGTTTGAACGAGTAAATGGCCACGAGTCGGAAAGCACGAAGGACGTGAAGAAGTTGGTTCCGAAGATCATGAAGAGGAAATATGATGATGAAAGAGGAGGTAGGATTGGGGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGGGGAGAAACATGAAGTGAAAGAGGGAGAGGATAAACTGTTTTGAGATTGAAATGAAATAGGAAAATTTGTAGATGTAGAGAGGGATTATTGATTGATATATGGGACATGGTTGGAATTCATAATAAAAGAGTTACAAAGGGGAGAGGGGGCTCATGCTTGTTTTCCAAATATAAAGCAAAAAAGGAAAGCATTTTCTGGTACATATATGAATACATACATGTTCACGGGTTCGGTTGCAAATCGGTTTTAGGTTTATGAACATGGGGACAAAGGAAACCCAAATGGGGCAGCCTACCGGTTAAGGCTTGTGGAAGGTTTAACAACCAACCCAAGTTCGAATCCGGGGGTGAGCAACCAGGGG | 2286 | 41.21 | MEFAAIEASIWNTSSYKPPPKLSLFKSSPKGCPKILHCSRFSRFKKRVVVLESRFSINSCYRVVREDRGLRSIWVKSGNVESHSKPPNLGFEIWVKKRLVLMAVCCGVLGFGCKRVLAAEGVLNGGGYVGLDQIKLSLMNSLPKVLMVLKVLKEQGLILAALFGLSAFFSMAETSITTLWPWKIRELAEKESENGVFKMLRNDVTRFLTTILIGTTVVNIGATALVTEAATAIFGEAGVSAATGVMTVAVLLLTEITPKSIAVHNATEVARFVSCNVSLNGNAEIAWSERKKDMIENVLEIKDTYVREVMTPLVDVVASDSSATLVDFHTLWGDLLESSTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIEKKTGYIVMRAEGIYDGHQYETVSGFVCEAFGYIPKTGESIRVVLEKEEEHEEYTEDQGDRQHQNQKEKNQIFQIEILAGNARKVGAVRFERVNGHESESTKDVKKLVPKIMKRKYDDERGGRIGEEEEEEEEEEGEKHEVKEGEDKLF | 558 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00295 | 558 | ProSiteProfiles | CBS domain profile. | 344 | 402 | IPR000644 | - | |
| Cati3g00295 | 558 | MobiDBLite | consensus disorder prediction | 457 | 476 | - | - | |
| Cati3g00295 | 558 | Pfam | Transporter associated domain | 427 | 502 | IPR005170 | - | |
| Cati3g00295 | 558 | CDD | CBS-pair-CorC-HlyC-assoc | 306 | 393 | IPR044751 | - | |
| Cati3g00295 | 558 | MobiDBLite | consensus disorder prediction | 532 | 548 | - | - | |
| Cati3g00295 | 558 | Gene3D | - | 406 | 488 | IPR016169 | - | |
| Cati3g00295 | 558 | Gene3D | - | 288 | 334 | IPR046342 | - | |
| Cati3g00295 | 558 | Gene3D | - | 340 | 405 | - | - | |
| Cati3g00295 | 558 | Pfam | Cyclin M transmembrane N-terminal domain | 157 | 274 | IPR002550 | - | |
| Cati3g00295 | 558 | ProSiteProfiles | CNNM transmembrane domain profile. | 148 | 273 | IPR002550 | - | |
| Cati3g00295 | 558 | SUPERFAMILY | FAD-binding-transporter-associated domain-like | 426 | 509 | IPR036318 | GO:0050660(InterPro) | |
| Cati3g00295 | 558 | Coils | Coil | 536 | 556 | - | - | |
| Cati3g00295 | 558 | PANTHER | HEMOLYSIN-RELATED | 425 | 527 | - | - | |
| Cati3g00295 | 558 | Pfam | CBS domain | 341 | 396 | IPR000644 | - | |
| Cati3g00295 | 558 | MobiDBLite | consensus disorder prediction | 525 | 558 | - | - | |
| Cati3g00295 | 558 | SUPERFAMILY | CBS-domain pair | 293 | 399 | IPR046342 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00295 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:2397441 | Cati3g00706 | Cati-Chr3:7758435 | dispersed |