Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00323	CTGGAACCCTCTCTGTTTAGTACCGGAACCCTCCAAACCTTCTCACTTTTTAATTATTTAATTAATTAATACAACACACAACGCAGCGGCTAAGACGATATGGGGAAACCGGCGCAGTCCGTGCCCGCCAGCCCGCCGATGGCGTAGCCGAGCCTGCCCGCCGGGCCCACCTCACCGGTAAGCATAGCCAAACCCAACCATGGGAAGCCCAAAACCCTACAAAACCTGCAACTGAATCTTCCCGGCAAAATTCAATTCCAAATCGATGTTCACCAAATTCCTCCTTCGATCCTCTTCTTCTCTCCCCATCCCTCTCTCTCCTCCGCTTACACCCTTCTTCTCCACCCCCTCCACCGCCGCCTCCGTCCGCCCCATCGCCGTCGTCACCGCCGCCGCCTCTCCACTCTCCGTTTCCCTTAACGAAACCCTACCTTACGAGCCGTCGTTGTCCAGAGGCCACCAGCCATCTCCACACCTCAAAACCCTACGTCAAGACAACAACGACGATTTATCACTGTTCGATGAAAGCTGCTTCACTCGTGTTTACGACGTCTCCGCCCTACGAGTCTCCGCCGACCGGTGTTACGCCCTCGAAAGCCAGCTCCGCGGCCATCTGCTGAACTGGCCTAGGGTTCGGAACATAGCTAGGGTTCCTGGAGACGAAATCGACGGCCAATTGCAGAAGTATTTCAACTCGAGCGATGATGAGCCCTTGGAGTCTTTGAATCGGAGGATCTACGGGAAGGCTGAGGGAGATGGGGAGCGACTGAGTCCGGTTTTGTATAGAGATAAGCTTGTGAAGACCTTCAATGCCAGAGGCTATGAGAAGTTCAGGAATTTGGCCAAGTTGTCGAGGCCGAAGAGGAAGAAGAAAAAGGAGGCGAGTGAAGTTAGAGAGAAGAAGACGAACGAGTGTTACTTATTAGAGGAGGTCGTTGATGATCGTCGGAGTGAGGAGGAGGATTTGAGTGGATTAATTGGAGAGGCTGAATGTAGGTTAGGAAAATGGAAAGGATCAACCAGGCTGTTGCTTTTGGATCATCGACATGCCGATAAATCAGTCGATGAATTGCCTGAGGCGATCAAGGCATGCTTTACGGGATCACCAGTTGAGCTTGTGAGATGCAAGCTGACTTTGTTTTACAGTTACTGGCAGATGAATGAGATATTAGAGGCTTTGCTTCCAAAGGGTATGATAGTTCCTTCATCCTTTGAGACTGTCGGGCATATCATCCACCTGAACTTGAGGGATGAACATCTTCCATATAAGAATCTTATAGCGAAGGTTGTTTTGGACAAAAACAGACCAAAGATACAAACAGTTGTCAATAAGATTGATGCCATTGATAACGAATTTAGAACCATGCAGCTTGAAGTTTTGGCTGGAAATCATTCTCTTGTGACAAGAATAGTAGAGAATGGAATTCATTTTCATGTTGATTTGGCAGCATTTCCGCCAACAGGTGACGTTTTTGCTGGGGTTGGTCCTTTAGCCATATCTGCAGCAAAAAAGGTTAAGCATGTGTATGCAAATGATTTAAATCCTCATGCAATCGACTATCTGGAAAGAAATTGCGTGCTCAACAAACTTGAAAGAAAGATTGAGGTTTTTAACATGGATGGGAGGAGATTCATTGATGCTATCTTTAAGAGTCAAAGTTCCCGACCCATCACACAAGTAGTCATGAATCTGCCTAAGGATGCAGCTGAGTATCTTGATGCGTTTAGGGGAATATTTAGAGATGTCGACAGGAACGAGGAGTTAAAGATGCCAAAGATTCATGTTTATGGATTCTCAAAAGCTCAAGATCCAGAGTTTGATTTTCATGAGTTCGGCTTGTCGCCCCAGGAAAATGGATGCTGTGCGCATCATTCGTTCTTCCCGAGTCGGTCGCATTTGCGAATCCAATATCGTAGC	1918	47.55	MFTKFLLRSSSSLPIPLSPPLTPFFSTPSTAASVRPIAVVTAAASPLSVSLNETLPYEPSLSRGHQPSPHLKTLRQDNNDDLSLFDESCFTRVYDVSALRVSADRCYALESQLRGHLLNWPRVRNIARVPGDEIDGQLQKYFNSSDDEPLESLNRRIYGKAEGDGERLSPVLYRDKLVKTFNARGYEKFRNLAKLSRPKRKKKKEASEVREKKTNECYLLEEVVDDRRSEEEDLSGLIGEAECRLGKWKGSTRLLLLDHRHADKSVDELPEAIKACFTGSPVELVRCKLTLFYSYWQMNEILEALLPKGMIVPSSFETVGHIIHLNLRDEHLPYKNLIAKVVLDKNRPKIQTVVNKIDAIDNEFRTMQLEVLAGNHSLVTRIVENGIHFHVDLAAFPPTGDVFAGVGPLAISAAKKVKHVYANDLNPHAIDYLERNCVLNKLERKIEVFNMDGRRFIDAIFKSQSSRPITQVVMNLPKDAAEYLDAFRGIFRDVDRNEELKMPKIHVYGFSKAQDPEFDFHEFGLSPQENGCCAHHSFFPSRSHLRIQYRS	551

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00323	551	Hamap	tRNA (guanine(37)-N1)-methyltransferase [TRMT5].	82	551	IPR025792	GO:0030488(InterPro)\|GO:0052906(InterPro)
	Cati3g00323	551	ProSiteProfiles	SAM-dependent methyltransferase TRM5-TYW2-type domain profile.	316	551	IPR030382	-
	Cati3g00323	551	Pfam	Met-10+ like-protein	315	394	IPR030382	-
	Cati3g00323	551	Pfam	Met-10+ like-protein	401	493	IPR030382	-
	Cati3g00323	551	Gene3D	Vaccinia Virus protein VP39	378	549	IPR029063	-
	Cati3g00323	551	CDD	AdoMet-MTases	401	463	-	-
	Cati3g00323	551	Gene3D	-	297	375	-	-
	Cati3g00323	551	FunFam	tRNA (guanine(37)-N1)-methyltransferase	298	376	-	-
	Cati3g00323	551	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	312	518	IPR029063	-
	Cati3g00323	551	PANTHER	TRNA METHYLTRANSFERASE	94	394	-	GO:0002939(PANTHER)\|GO:0005737(PANTHER)\|GO:0008175(PANTHER)\|GO:0009019(PANTHER)\|GO:0030488(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00323	K15429	tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:2603456	Cati5g00308	Cati-Chr5:3042036	dispersed