Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00333	TTTTCCATAACAAATTGACCCAAGAACACCATCAAAATGGCAATTAGCAACAAGAGTTTGATTTGCATGGTTTTGGCAACATTTGGTGTTTTGGGTGCAATTTCACAAGTAAAAGGCTATTCAAGCTCTTACTGTGGCCCCGCGTCTCGTTGCTCGCATCAAACCCTCTATTGCCCCTCCGAATGCCCCTCCAGCGAATCCAGCGATCCCGAGGCTAAGGTTTGCCGTATCGACTGCTACTCCCCTAAATGCAAGGCCGAATGCAAACACCGTAAACCAAACTGCAATAGCCCGGGATCGGCATGCTACGACCCACGTTTCATCGGTGGAGACGGCATCGTGTTCTATTTCCACGGCAAGGTCAACCAGCACTTCAGCTTAATCTCCGACTCCAACCTCCAAATCAACGGTCGTTTCATCGGCCACCGACCCACGGGCCGGACCCGCGACTTCACCTGGATCCAAGCATTGGGCCTCCTCTTCAACTCCCACACCTTCTCACTAGAAGCCACCCGATCCGCCACGTGGGACTCCGAAATCGACCACCTCAGGATCACCTACGACGGAGAACGGATCTCGTTGCCGATGGGCGGCCTGTCCACGTGGGAGTCACGTGAGGACGGGATCAAAGTGGAGAGAACCTCCGGGGTGAACAGCGTGATGGTGAGCCTGCCGGGAGTGGTGGAGATCTTGGCGAATGTGGTGCCGGTCACCTCGGAAGACGACAGGATCCACGGGTACAAGGTGCCTTCCGATGACTGCTTTGCTCATTTGGAGGTTCAGTTTAGGTTTTCGGGGCTTTCGGATGAGGTGGAAGGGGTGTTGGGAAGGACGTATCGGCCGGATTTCGAGAACCCCGCGAAGCCAGGCGTCGCGATGGCGGTGGTCGGCGGAGAGGACCGGTACCGGACCACCGATCTGTTGGCCGCGGATTGCGCCACGTGCATCTTCGATTCGAGCAAAGGGGAGCAGAAGAAGATGGTGAAGGAGTATGGAACCTTGGATTGCTCTGCCAAGGGATTGTTCCATGGAAATGGGATTGTTTGCAAGAACCCGGGATCGGCTTGCTACGACCCGCGTTTCATCGGCGGAGACGGCATCGTGTTCTATTTCCACGGCAAGGTCAACCAGCACTTCAGTTTAATCTCCGACTCCAACCTCCAAATCAACGGTCGTTTCATCGGCCACCGACCCACGGGCCGGACCCGCGACTTCACCTGGATCCAAGCCCTGGGCCTCCTCTTCAACTCCCACACCTTCTCACTAGAAGCCACCCGATCCACCACGTGGGACTCCGAAATCGACCACCTCAGGATCACCTACGACGGAGAACGGATCTCGTTGCCGATCGGCGGCCTGTCCACGTGGGAGTCACGTGAGGACGGGATCAAAGTGGAGAGAACTTCCGGGGTGAACAGCGTGATGGTGAGTTTACCCGGAGTGGTGGAGATCTTGGCAAACGTGGTGCCGGTCACTTCGGAAGACGACAAGATCCACGGGTACAAGGTGCCGTCCGATGACTGCTTTGCGCATTTGGAGGTTCAGTTTAGGTTTTCGGGGCTTTCGGACGAGGTGGAAGGGGTGTTGGGAAGGACGTATCGGCCGGATTTCGAGAATCCCGCGAAGCCAGGCGTCGCGATGGCGGTGGTCGGAGGAGAAGACCGGTACAGGACCACCGATCTGTTGGCGGCGGATTGCGCCACGTGCATCTTCGATTCGAGCAAAGGGGAGCAGAAGAAGATGGTGAAGGAGTATGGAACCTTGGATTGCTCTGCCAAGGGATTGTTCCATGGAAATGGGATTGTTTGCAAGAAGTGA	1818	56.16	MAISNKSLICMVLATFGVLGAISQVKGYSSSYCGPASRCSHQTLYCPSECPSSESSDPEAKVCRIDCYSPKCKAECKHRKPNCNSPGSACYDPRFIGGDGIVFYFHGKVNQHFSLISDSNLQINGRFIGHRPTGRTRDFTWIQALGLLFNSHTFSLEATRSATWDSEIDHLRITYDGERISLPMGGLSTWESREDGIKVERTSGVNSVMVSLPGVVEILANVVPVTSEDDRIHGYKVPSDDCFAHLEVQFRFSGLSDEVEGVLGRTYRPDFENPAKPGVAMAVVGGEDRYRTTDLLAADCATCIFDSSKGEQKKMVKEYGTLDCSAKGLFHGNGIVCKNPGSACYDPRFIGGDGIVFYFHGKVNQHFSLISDSNLQINGRFIGHRPTGRTRDFTWIQALGLLFNSHTFSLEATRSTTWDSEIDHLRITYDGERISLPIGGLSTWESREDGIKVERTSGVNSVMVSLPGVVEILANVVPVTSEDDKIHGYKVPSDDCFAHLEVQFRFSGLSDEVEGVLGRTYRPDFENPAKPGVAMAVVGGEDRYRTTDLLAADCATCIFDSSKGEQKKMVKEYGTLDCSAKGLFHGNGIVCKK	593

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00333	593	Pfam	Root cap	503	559	IPR009646	-
	Cati3g00333	593	Pfam	Root cap	249	305	IPR009646	-
	Cati3g00333	593	PANTHER	ROOT CAP DOMAIN-CONTAINING PROTEIN	32	338	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00333	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr11:57110901	Cati3g00333	Cati-Chr3:2744875	dispersed
	Cati	Cati-Chr3:2744875	Cati3g00335	Cati-Chr3:2744875	dispersed
	Cati	Cati-Chr3:2695425	Cati3g00333	Cati-Chr3:2744875	proximal
	Cati	Cati-Chr3:2744875	Cati3g00334	Cati-Chr3:2744875	tandem