Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00355	ATGACGATGATGAGACCACTGATGATGGATTTTGAGCGTGTTAGAGATTGTGGCCACCTGGACACCATCAATCGCGAGAAATTGGATTTCGACCTTGAAAAGGTGTGCTCGGTGGGGCTTAGAAACATGGAGGCTGATTTTCTTAACGTGACCGTTCAATCTTTAATGCGAGTGACTCCCTTGAGAAACTTCTTTCTCCTCCCTGAAAATTACAGACACACCAAGTCTGAAGTTGTTCAGCGGTTTGGCGAGCTGACAAGGAAGATATGGCATGCACCCAACTTCAAGGGACAGGTTAGTCCTTTTGAATTTTCGAAAGCTGTTAGAAAGAAATTTGTAAAATCCGATCCTGTTGATTTTACACCATGGCTTCTCAAGACCCTGCACAGGGGGGTTCGAACTTCTGAGACGAGAGATACCGTCATCTCTGACTGTTTCAAGGGGGTAGTCCAAGTTGCTGGAAACACAGATGATAAAAGTACAAAGCACATCTTGATGGTTGGGCTGGATTTGCCAGCATTACCAGTTTCCATGGACTCGAACAAAATTCCCGAGGTTCCACTTTTCGACATCCTGAAGGGGCGTCCTCGTCTTACAGAACTTCCACCCTATCTTATTCTGTACATGCGTCGGTTTACTAAGAACAGTTTATCATCTAGAGTGGAGAAAAACCCAACTCTTGTTAACTTCCCTTTGAAGAATCTGGAGCTTAAGGATTATATAATACCTTCATCGTTATCTGTGCCTTCCAAGTATGATTTGCTTGCAAACATTGTTCATGATGGTAAACCCTCCTCCTATACGGTATTCGTTCACCAGAAGTCGGAACAACTCTGGTATCAAATACGAGATCTTCATGTTGAAGAAACTCTACCGCAAACTGTTGCATCTTCTGAGGCTTACATGCTCGTATACGAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTTAATATATATATATATATATATATTTCCTGTTTTTACCTATATTACTATAGAGGTGGGTTCAAAGGTGAACCACTTTTTGGTTGTGAACGTGA	1039	42.83	MTMMRPLMMDFERVRDCGHLDTINREKLDFDLEKVCSVGLRNMEADFLNVTVQSLMRVTPLRNFFLLPENYRHTKSEVVQRFGELTRKIWHAPNFKGQVSPFEFSKAVRKKFVKSDPVDFTPWLLKTLHRGVRTSETRDTVISDCFKGVVQVAGNTDDKSTKHILMVGLDLPALPVSMDSNKIPEVPLFDILKGRPRLTELPPYLILYMRRFTKNSLSSRVEKNPTLVNFPLKNLELKDYIIPSSLSVPSKYDLLANIVHDGKPSSYTVFVHQKSEQLWYQIRDLHVEETLPQTVASSEAYMLVYEQQQQQQQQ	314

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00355	314	ProSiteProfiles	Ubiquitin specific protease (USP) domain profile.	38	308	IPR028889	-
	Cati3g00355	314	SUPERFAMILY	Cysteine proteinases	38	307	IPR038765	-
	Cati3g00355	314	PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	37	311	IPR050185	-
	Cati3g00355	314	Pfam	Ubiquitin carboxyl-terminal hydrolase	38	305	IPR001394	GO:0004843(InterPro)\|GO:0016579(InterPro)
	Cati3g00355	314	Gene3D	Cysteine proteinases	19	309	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00355	K12847	U4/U6.U5 tri-snRNP-associated protein 2

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:2848976	Cati3g00355	Cati-Chr3:2888516	dispersed
	Cati	Cati-Chr3:2848976	Cati3g00355	Cati-Chr3:2888516	proximal