AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00356 TGGATATTTTTACCAAACACTAACCCCATAAGAAAAACGTTGAAAAATGCTAATAACCATCGATGACTAAATAATTCCTGCTATATTTATACCTAACTACCACATCAGAAAATCTTGCACGCCGCCCTACATCTCCGCCTCTAACCGCCGGCGATCACTATCGCCGCCGTGGTGGGTATCACGACAAATGTCGATCACAATTTGGGTTTAATCTAAAAACCCAAATAAAACCAACCTTTTCCCCCAAAATCAAACCCTCATGGAGGAGCCCAATATCGATTCTAACAAGTATTCTAAAGAACTAGAAGTGGGCGTTAGGGTGGTTCAACTGGCATGTTGTCTATGCCAGAAGGTGCAAAAGGGTTCGGACCAAAAGGGTTCTTTTGGTCCGAACCCTGATCAGGTCGTCTCGAAGGACGACGATTCACCGGTTACGGTGGCCGAAAACGTCTCGATTGTTGCTGAAGAAGATGCTCAAACGCTCTCCGACGCCAATGCCGCAACTTTACTAGCGTCCGTGGTTGCAACCGTGAACGAGACTTTGTCTATGGCGCCCCGGTTCGGTCTCAAGAGTCCAGCCGCACCCCTTGGGGCTTCAGAAGTTCTTGATGCCATAAGCCGATGCAACTCAACCGGTGGTCCGGTCGGAAGGCATTGGGTCCTCGACCCCGTTGACGGAACTTTAGGGTTCGTGCGCGGGGACCAGTATGCCGTCGCTCTGGCTTTGATCGAAAACGGGCGGGTTATGGTCGGAGTTCTCGGGTGCCCAAATTATTCGAGTAAAAAGAAGCTCGTAAACAATTCAAACGTCGGAACGTTGTCGTCGGATTTGTGGCAAGAAGGGTGTGTTATGTACACGAGGAAAGGTAGCGGTCGAGCGTGGATGCAGCCGTTGGTTCATGGTGATGGGATCTTGGAGTGGCCGAACTCGGCTAGCGTTATACGGGTTTCTTCCATCGATAACCCTGCAATGGCTACGTTTTGTGAACCAGTGGAGAAGGCCAACTCGAACCACTCTTATACGGCTGGACTCGCATACACGATAGCTCGTGGGGATGCGGAGATATACATGAAGTTTGCGAAGGCTGGGTACAAGGAGAAGATATGGGATCATGCTGCCGGTGTGGTGATCGTGGAGGAGGCTGGCGGGGTTGTGACGGATGCCGGTGGTCGGCCGCTGGATTTCTCGAGAGGGGTGTATCTCGAAGGTGTCGATAGAGGGATCGTTGCGTGTTCCGGGGTGAATTTGCATGAGAAAATTATTGGGGCTGTTTATGCAAGCTGGGATTCCTCTCATCTATGA 1303 50.65 MEEPNIDSNKYSKELEVGVRVVQLACCLCQKVQKGSDQKGSFGPNPDQVVSKDDDSPVTVAENVSIVAEEDAQTLSDANAATLLASVVATVNETLSMAPRFGLKSPAAPLGASEVLDAISRCNSTGGPVGRHWVLDPVDGTLGFVRGDQYAVALALIENGRVMVGVLGCPNYSSKKKLVNNSNVGTLSSDLWQEGCVMYTRKGSGRAWMQPLVHGDGILEWPNSASVIRVSSIDNPAMATFCEPVEKANSNHSYTAGLAYTIARGDAEIYMKFAKAGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSRGVYLEGVDRGIVACSGVNLHEKIIGAVYASWDSSHL 347
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00356 347 ProSitePatterns Inositol monophosphatase family signature 2. 283 297 IPR020550 GO:0046854(InterPro)
Cati3g00356 347 ProSitePatterns Inositol monophosphatase family signature 1. 133 146 IPR020583 -
Cati3g00356 347 Gene3D - 9 217 - -
Cati3g00356 347 PANTHER PHOSPHATASE 5 343 IPR051090 GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER)
Cati3g00356 347 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 11 345 IPR006239 GO:0006790(InterPro)|GO:0008441(InterPro)
Cati3g00356 347 MobiDBLite consensus disorder prediction 35 56 - -
Cati3g00356 347 Pfam Inositol monophosphatase family 111 339 IPR000760 -
Cati3g00356 347 CDD PAP-phosphatase 14 340 - -
Cati3g00356 347 Gene3D - 229 341 - -
Cati3g00356 347 SUPERFAMILY Carbohydrate phosphatase 12 340 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00356 K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:2908497 Cati4g01721 Cati-Chr4:64376610 dispersed