AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00360 ATGGCGAATTCCTTAGCTCGGTTCGAGTCTATGAAGAGGATTCGCAATCGCTTCGTCGTTGCCGTTGAAGATGTGAGTGATTTGTGGCCCCTTCTCAAGGAGGGATTTCAAAGACGGCTTCCATTTAAAAAAACCATATTGAACAACAAAACCCGTAATCCTGTGCCTGTGGAGAAGCTGCCAGCTGAGTTTGTACTGACAACAGATCCAAGGCTCCGCACCCAGTTCCCTCAGGAGCAATTGCCGTTTTGGTTTCGAGAACCATATGCAACTGTGATTCTTGTGACCTGCGAGGACCTAGATGAGTTCAAGACAATCCTAAAACCACGTCTGAAATCAGTTGTGCAAAATGATGAGGAGTGGTTCATTCTCTTTGTGTCTAAAGCTGCACCCAATAATGACAAAGCAATAAACAAAGCAAAAAAAGTTTATTCCAGACTTGAAGTTGATTTCAACACAAGGAAGAGGGAAAGGTAA 477 43.82 MANSLARFESMKRIRNRFVVAVEDVSDLWPLLKEGFQRRLPFKKTILNNKTRNPVPVEKLPAEFVLTTDPRLRTQFPQEQLPFWFREPYATVILVTCEDLDEFKTILKPRLKSVVQNDEEWFILFVSKAAPNNDKAINKAKKVYSRLEVDFNTRKRER 158
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00360 158 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1 9 158 IPR045126 GO:0006891(PANTHER)|GO:0034498(PANTHER)|GO:0048193(InterPro)|GO:1990071(InterPro)|GO:1990071(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00360 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
35521 Cati3g00360 Cati7g03325
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:2951494 Cati7g03325 Cati-Chr7:70289692 dispersed