AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00397 ATGGAGATCGCCCCAAATCAGCCCGAAAACGAAAACCCATCTCCCTCCAGCTCCACCAACAGCAACGGCCACGCCGCCGCCTCCGCCGCCGCCACCGGCGCCGGAACACCAAGACCCGTTTCAAGATCCGAACCGAACCCATACCCGACAACCTTCGTCCAAGCCGACACGACCTCCTTCAAACAAGTGGTCCAGATGCTAACCGGATCCTCCAAACCGGCCCAAGATCCGAATCCGAATCCGAATCCAGCTCCGGCCAAGATTTCCATCCCGCCGGTGAAAACCAACCCGCAGAAGAAGCAAGGATTCAAGCTCTACGAACGCCGGAATAGCTTGAAAAACGGGCTTATGATCAACCCATCGGTCCCTAAATTCGGCCATGGCGGACATGGGTTGTCGCCGAGGATCCACGAGATACTCTCTCCGAGCATTCTTGATTTTCCGGCGCTGGTTCTAAGTCCGGTGACGCCGTTGATCGAGGATCCGTTCGACAGGTCGTCGTCGCCGTCGGTCGGGAATTCGTCGTCGGAGGAAGAGAGGGTGATCGCGGAGAAAGGGTTTTACTTGCATCCGTCGCCCAGGGCGGCGACGCCGCATACGGCGGAGCCACGGCTGCTGCCGCTTTTTCCGGTGACGTCGCCGGAGTCGGAGTCGGTTTAA 660 59.09 MEIAPNQPENENPSPSSSTNSNGHAAASAAATGAGTPRPVSRSEPNPYPTTFVQADTTSFKQVVQMLTGSSKPAQDPNPNPNPAPAKISIPPVKTNPQKKQGFKLYERRNSLKNGLMINPSVPKFGHGGHGLSPRIHEILSPSILDFPALVLSPVTPLIEDPFDRSSSPSVGNSSSEEERVIAEKGFYLHPSPRAATPHTAEPRLLPLFPVTSPESESV 219
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00397 219 MobiDBLite consensus disorder prediction 45 75 - -
Cati3g00397 219 Pfam VQ motif 47 73 IPR008889 -
Cati3g00397 219 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 17 216 IPR039611 -
Cati3g00397 219 MobiDBLite consensus disorder prediction 76 90 - -
Cati3g00397 219 MobiDBLite consensus disorder prediction 7 27 - -
Cati3g00397 219 MobiDBLite consensus disorder prediction 191 219 - -
Cati3g00397 219 MobiDBLite consensus disorder prediction 1 101 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00397 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:3309765 Cati3g00822 Cati-Chr3:9567037 dispersed