AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00414 CTAAATACCTCTCAAAGAAACACACATATAGAAGAGGCAGCACAAAAACATGGGGTGGACATGGAAGGAATCATACTTGGACTTAATCCTGGTACCATTGGGGTTATCTATCATGTGCATCTATCATCTCTTCCTTCTTTACAGATACCTCAGGATCCCCGAAACAACCACAATCGGCTACGAGAATCATAACAAAAATGCCTGGGTTGAGAAAATGCTTCAGATTGATGCTAGAGATAGAGGGTTTGCTATATCAGTCCTCAGCACTCACTTATCTGCAGCCACTTCTTTATCTTCAATTTCTTTAGCTTTATGTTCCCTAATCGGAGCCATTCTCGGAGGTTCTTCGTCAAACTTCTTCGCACGCAACTTCGTCTTAGGGGACAAGAGCCGTTCCACGGCCTCGATCAAGTACATCGCCATGCTATCGTGCTTCTTGCTAGCGTTTGCGTGTTTTGTGCAAACCACGAGGCACTTTGTGCATGCCAACTTCCTCATAAGCATCCCCAACGGTGAGGTGCCCGTCCATCACATCCAAAAGGCGGTGATTCGAGGAAGCAACTTCTGGGCCGTCGGGTTGCGGGCCCTCTACTTTGCGGGCACTTTGGTCCTGTGGATCTTCGGACCGATCCCGATGTTTGTTTCTTCGGTGGTGGCGGTCGTGATCTTGAATTTTCTAGATACCAATAAAGATGAAATGATTCGGTATCGGTTGGAGCGGAAGGGTAAAAGCGGTAACGTTTTGAAGAAGGTCGAGCGTAGTATGACTTCGGTGGTCGAGGGTTTCGACCGTGATGGAAGGGCAAAAAGAGAAACGAAAAGAAGTCTCTCGAGTCTAGAGATTTCAGATAGTCGGTAATAAATGAATAGAGTAATAAAATATTCATTATGAATGTCGTGACGGATATTTGATAGTCAGAAAATAGGTGTTAATTTTTTGGATTTTTAAAATATTTAAGTTCACTTTTAAGTTTTAATCTAATTTAAAATTGATCATTGTATGCTATAAATATATACAAATTAGACTTGAAAATAACTAATCTATTAT 1048 42.08 MGWTWKESYLDLILVPLGLSIMCIYHLFLLYRYLRIPETTTIGYENHNKNAWVEKMLQIDARDRGFAISVLSTHLSAATSLSSISLALCSLIGAILGGSSSNFFARNFVLGDKSRSTASIKYIAMLSCFLLAFACFVQTTRHFVHANFLISIPNGEVPVHHIQKAVIRGSNFWAVGLRALYFAGTLVLWIFGPIPMFVSSVVAVVILNFLDTNKDEMIRYRLERKGKSGNVLKKVERSMTSVVEGFDRDGRAKRETKRSLSSLEISDSR 269
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00414 269 Pfam Protein of unknown function, DUF599 13 214 IPR006747 -
Cati3g00414 269 PANTHER OS02G0292800 PROTEIN 4 227 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00414 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35529 Cati3g00414 Cati7g03254
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr4:68827919 Cati3g00414 Cati-Chr3:3480890 transposed
Cati Cati-Chr9:24308524 Cati3g00414 Cati-Chr3:3480890 transposed
Cati Cati-Chr3:3480890 Cati7g03254 Cati-Chr7:69484170 wgd