Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00446	AAAGTGAGAGGGTTGGGAGGGTTGGGAAATATGGGTGTGGATAGCCTAATGGTAACGGCGTGAAAGAAACCATCATTCCCCTTTTCTCTCTCTCTCTAAAAGGGCAAAAAGAAGACCTCAAAATTCCACTTCAATGGCGAACAGCAACCTTCCTCGAAGAATTATCAAGGAAACTCAGCGCTTACTCAGCGAACCAGGAGGAGTCTTTAAGCTGGAGTTATTTCTGCCTGAGGATTATCCAATGGCTGCCCCCAAGCTTGGTAGAATATGTCTTGATATCCTAAAAGACAAATGGAGCCCTGCTCTTCAGATTCGCACCGTACTCCTGAGCAGCATTCAAGCGCTTTTAAGCGCTCCAAACCCAGACGATCCCCTGTCCGAAAACATAGCAAAGCACTGGAAATCAAATGAAGCAGAGGCTGTGGAAACTGCCAAGGAGTGGACTCGTCTGTATGCAACTGGTGCTTAATCGAATGTATTGCTACTCGTGCTTCTGTCACTTTGTAAATCCAAGCCCATGGAACGGAGTTGCCCATAAATTTCAATCGGTTTATCGATATAAGTTTTCTACTACCACATTTCAAGGATACATACTTTCGTTTACAAATAGTCAAAAGGTGGCAATGCATTATCGGTTTTAGTCTAAAGTGTGTAATTGGTATAATTGACTCGATACGCTTTTAACTGCTATGCTGACTATTGGGTGAAGGCCAAATGGACTTTTCTTTAAGTTTGTTCTAACCGGTTAATCGACCCCTCTTTTCATGGCCTTTAACCCTTTTATTTATTTATCAAGTATGATTAAAATGTTGCTTTTCAAGTTATGTATAGTGGATCGAAATTGTCATACGAATTGTACCACTTTTGTGCAATTTACCCAAGAAAATACAAAGGGTCTGCTTGTTATCGAGCGTAATGGGATTTATAG	928	41.38	MANSNLPRRIIKETQRLLSEPGGVFKLELFLPEDYPMAAPKLGRICLDILKDKWSPALQIRTVLLSSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYATGA	111

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00446	111	CDD	UBCc	22	104	IPR000608	-
	Cati3g00446	111	PANTHER	UBIQUITIN-CONJUGATING ENZYME E2	22	99	-	GO:0000209(PANTHER)\|GO:0005634(PANTHER)\|GO:0006301(PANTHER)\|GO:0061631(PANTHER)\|GO:0070534(PANTHER)
	Cati3g00446	111	SUPERFAMILY	UBC-like	22	109	IPR016135	-
	Cati3g00446	111	Pfam	Ubiquitin-conjugating enzyme	22	103	IPR000608	-
	Cati3g00446	111	ProSiteProfiles	Ubiquitin-conjugating (UBC) core domain profile.	1	109	IPR000608	-
	Cati3g00446	111	Gene3D	Ubiquitin Conjugating Enzyme	20	111	IPR016135	-
	Cati3g00446	111	SMART	ubc-7	8	109	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00446	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	35565	Cati3g00446	Cati7g03223

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:3812221	Cati9g03644	Cati-Chr9:79172410	dispersed
	Cati	Cati-Chr3:3812221	Cati5g01556	Cati-Chr5:19112425	wgd
	Cati	Cati-Chr3:3812221	Cati7g03223	Cati-Chr7:69097999	wgd