AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00451 ATGGCTGCTTCCATTTCACTTCTCTTCTTCTTCATCTCCTTCCAACTCCTTTCCTCCATCTCACAAGCCACCGTACCCGCTTCAGACACTTTCACCTACGTAAACCAAGGCGATTTCGGCGACTACATAGTCGAATACGACGCCAATTATCGACCCCTCCCACCTTTCAACAACCCTTTCCAGGCTTCCAGCTATGCTTCTACAACACCACCCCTGATTCATTCACTCTCGCGTTCGATCCGAATCCCTCATGCAGTGGGTCTGGGAAGCCAACCGCGGAAGCAGGCCCGGCCCTGGGGCCGTGCAGACCGTGCGACCGCACAGGGCATCAAGGCCCACGGGGCATCAAAATTCTATATAATACCGACACCGCCGGCAAAGGCGTCGTCGGGTTTCAAATTCTTCCGAATGGTAACATGGTTCTTCACGACGGGAAGGTGGCAAAGCCCGAGTCGGCTCGTGAATCGGAGCTCCGAGTCGAGTAACGTCGATGGGGCCTACAGTTTGGTGATGGAACCAAAAGGGTTAGTCATGTATTACAAGAGCCGTAACACGGTTCGTCCGACGGTGTATTGGATGTCGACCGAATGGTTCACTATTGACAAAGGTAGTTTGACCAATTTAACCCTCACGTCGTTATCGTATAACGACGAGGGCTTTATCTATTATTTAAGGTTCATATACTTTATGACAAACCCATCGTCAAATTCGAATCGGAACATGGCGCTTTCGCGATACAATAACACGTTATCGTATCTTCGATTGGGGGTAGATGGGAACCTTAGGTTCTTGACGTATAACCCTAACGCGCAAGGCGCTTCTTGGGAGGAGATCGATGGAGGGCGAGTGTTAGTTACCAGAAAGATGCGGGAAGATAGCCAGTGCGTGGCTTGCCCGACCCCAAATGGGCTAAGTGGGTGGACTAGAGATTGCGAGTTGAAAAAGGTGACATCTTGCCAGAGTGGCGAGTTTGGGTACTATAAGATCGAAGGGGTTGACCATTTTATGATAAAGTACACGAGGGGTGATGGGCCAACGAAGCAAAGTGATTGTGAGGCCAAATGTAGTAAGGATTGTAAGTGTATGGGGTATTTCTATCATACGGATCGATCGAGGTGTTGGATCGCTTACGATTTGAAAACGTTGACGAGAAATGATAACCAAAAGTAA 1170 49.32 MAASISLLFFFISFQLLSSISQATVPASDTFTYVNQGDFGDYIVEYDANYRPLPPFNNPFQASSYASTTPPLIHSLSRSIRIPHAVGLGSQPRKQARPWGRADRATAQGIKAHGASKFYIIPTPPAKASSGFKFFRMVTWFFTTGRWQSPSRLVNRSSESSNVDGAYSLVMEPKGLVMYYKSRNTVRPTVYWMSTEWFTIDKGSLTNLTLTSLSYNDEGFIYYLRFIYFMTNPSSNSNRNMALSRYNNTLSYLRLGVDGNLRFLTYNPNAQGASWEEIDGGRVLVTRKMREDSQCVACPTPNGLSGWTRDCELKKVTSCQSGEFGYYKIEGVDHFMIKYTRGDGPTKQSDCEAKCSKDCKCMGYFYHTDRSRCWIAYDLKTLTRNDNQK 389
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00451 389 ProSiteProfiles PAN-Apple domain profile. 319 389 IPR003609 -
Cati3g00451 389 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 150 378 IPR051343 -
Cati3g00451 389 CDD PAN-AP-plant 318 388 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00451 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:3891377 Cati3g00455 Cati-Chr3:3972486 dispersed
Cati Cati-Chr3:3862668 Cati3g00451 Cati-Chr3:3891377 tandem
Cati Cati-Chr3:3891377 Cati3g00452 Cati-Chr3:3900777 tandem