Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00452 | ATGGTGGTTGGAGGTGGTGGTTACCGGTGGCTGTGGTGGCCGGTGGCGGTCGTGGCCGGAGGTGGTGGTGGCTGGTGGCGGTGGACGGAGATGGTGGTGGCAGGCCGGTGGCGATGGTCGGAGGTGGTGGACGCCGGTGGCGGTGGCCGGAGGTGGTGGAGGCCGGTGGCGGTGGCCGGAGGTGGTGGAGGCCGGAGGTGGCCGAAGGTGATGGTGCACATTAGGATGAGGGGCGATTTCGGCGATTACATTGTCGAATACGGCGCCAATTATCGAGCCCTCCCGCCTTTCAACAACCCTTTCCAGCTTTGCTTCTACAACACCACCCCTGACTCATTCACTCTTGCTCTACGTATGGGCACGGTCCGATCCGAATCCCTCATGCGATGGGTCTGGGAAGCCAACCGCGGAAACCCAGTCCGTGAAAACGCCACCCTCACCTTCGCGGCCGACGGCAACCTCGTCCTCGCGGACGCCAACGGCCGGATCGCCTGGCAAACCAACACCGCCGGCAAAGGCATTGTCGGTTTCCAGGTGCTTCCGAATGGTAACATGGTTCTTCACGATGGGAAGGGTAATTTCGTCTGGCAAAGCTTTGACTCGCCGACGGATACCCTTTTGGTGGGTCAGTATCTCCGAGCCGGTGGGCCGAGTCAACTCGTGAGTCGGAGCTCCGAGTTGAGTAACGTCGATGGAGCTTATAGTTTGGTGATGGAACCCAAAGGGCTAGCCTTGTATTACAAGAGCCCTAACGCGGTTCGACCAATGGTATATTGGATGTCGACCGAATGGTTCACTATCGACAAAGGTAGTTTGATCAATTTAACCCTCACGTCCGAACCGTATACCGACGAGGGGTTTATTTATTATTTAACATTCCAATACTTTATGACAAATCCATCGTCAGACTCGAACCGAAACATGGCGTATTCACGATACAATAACACGTTATCGTATCTTCGATTAGGGGTAGATGGGAACCTTAGATTCTTGACGTATAACCCGAATGTGCAAGGCGAATCTTGGGAGGTTATATATACGTTTTTCGATAGGAGATCGATGGAGGGCGAGTGTCAGTTACCAGAAAGATGCGGGAAGTTTGGTTTGTGTGAGGATAGCCAGTGTGTGGCTTGCCCGCGACCCCAAACGGGCTAA | 1155 | 55.06 | MVVGGGGYRWLWWPVAVVAGGGGGWWRWTEMVVAGRWRWSEVVDAGGGGRRWWRPVAVAGGGGGRRWPKVMVHIRMRGDFGDYIVEYGANYRALPPFNNPFQLCFYNTTPDSFTLALRMGTVRSESLMRWVWEANRGNPVRENATLTFAADGNLVLADANGRIAWQTNTAGKGIVGFQVLPNGNMVLHDGKGNFVWQSFDSPTDTLLVGQYLRAGGPSQLVSRSSELSNVDGAYSLVMEPKGLALYYKSPNAVRPMVYWMSTEWFTIDKGSLINLTLTSEPYTDEGFIYYLTFQYFMTNPSSDSNRNMAYSRYNNTLSYLRLGVDGNLRFLTYNPNVQGESWEVIYTFFDRRSMEGECQLPERCGKFGLCEDSQCVACPRPQTG | 384 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00452 | 384 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 98 | 381 | IPR051343 | - | |
| Cati3g00452 | 384 | Pfam | S-locus glycoprotein domain | 290 | 378 | IPR000858 | GO:0048544(InterPro) | |
| Cati3g00452 | 384 | Gene3D | - | 89 | 201 | IPR036426 | - | |
| Cati3g00452 | 384 | Pfam | D-mannose binding lectin | 131 | 212 | IPR001480 | - | |
| Cati3g00452 | 384 | SMART | blect-4 | 85 | 202 | IPR001480 | - | |
| Cati3g00452 | 384 | CDD | B-lectin | 85 | 202 | IPR001480 | - | |
| Cati3g00452 | 384 | ProSiteProfiles | Bulb-type lectin domain profile. | 82 | 200 | IPR001480 | - | |
| Cati3g00452 | 384 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 112 | 249 | IPR036426 | - | |
| Cati3g00452 | 384 | PIRSF | SLG | 65 | 383 | IPR035446 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00452 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:3900777 | Cati3g00455 | Cati-Chr3:3972486 | dispersed | |
| Cati | Cati-Chr3:3891377 | Cati3g00452 | Cati-Chr3:3900777 | tandem |